Papilio machaon (common yellow swallowtail): 106721173
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Entry
106721173 CDS
T05138
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106721173
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
106721173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
Tropomyosin
AAA_21
AAA_25
RdRP_helical
FtsK_SpoIIIE
AAA_27
Motif
Other DBs
NCBI-GeneID:
106721173
NCBI-ProteinID:
XP_014371551
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MSKVFNNEGIKAGCIYRIALENFVTYKQVVLYPSQSLNLIIGPNGTGKSTFVCAIILGLC
GKTSVIGRAKKISEYVRSGCEESTIEIELYRNSGERNVIITRNFNLRDVSTWAIDHKTVR
EKQVLELIASLNIQVDNLCQLLPQDRVQDFSKMNPQELLRSTLSAVGGQESVSQLDELIE
CRNKHRGLSTKVQNNAQLLQEQIRLNERLKTVIDGMHQRKEIEKQIEICEKKKLWLEYQT
LREQVIECERDKKEAVKLVNTHKSKMEPLEKVIDKAKVGISKLEQEKLSANREINSLKDS
IKEAISSARQQEYTLKDLEAALQEKIERHQNKERELLEANAKLEKLRNDKKMLIEKIGDD
VVRADFLEISISENFRLERNLHKRELRLERNLYKRDLQFREKPLQFLNLIIFFYRINNLE
NVDAKRLEVLRAYSEDCYKAVMWLRENKHMFSRPVYEPIMLEINFTDAKFARYLEATVPA
RDLAAFTFESSADMNLFLQKVRRERGLKLVNAICSSNPATTHRPDITQLSYLGFYTYLID
TINGPEPIINYLCRQYGIHRIPIGNDHTYKNSAKVPSNITHFFTENHRFSVRVSAYSGVK
SSSIIEIRPARLLANTVDVDQIHSLNNQSIPVKLDYNRNSIVHEESKLRELKNDMTNVQA
TLENIENQLIRVKTKAKEKLNEAKRSCNNKLPNDPDFPHTEDFAVLPSEINELMTHCFEL
QARVNCMDEGDERAIKEYEEREQMIAKLKNDVESSGDVSKQLEIKMNRIKSKWLPPLEAL
LRDIDKTFGDMFEKLGCAGEIKLDKAGADEDYDKYGVSILVRFRSSEQLAQLTRHAQSGG
ERALTTAIYLMALQRRTTVPFRCVDEINQGMDAINERKMFQLLVQVTTECDNAQYFLLTP
KLLTNLEYNSKITVHTIMNGPRVMHHSKWKCQQFIDNARKYMSTQ
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtttttaataacgaaggtataaaagccggttgtatttacaggatagccctt
gagaattttgtgacatacaaacaagtcgtgctatatccaagtcaatcattaaatttgata
atcgggcccaatggtacaggaaaatcgacttttgtttgcgcaatcattttgggtctttgc
ggcaaaacaagtgttattggacgagccaaaaagatatcagagtatgtaagaagtggatgt
gaggaatctacaatagaaatagaactctataggaattccggtgaaagaaatgttataata
acaagaaactttaatctcagagatgtctctacatgggcgatagatcataaaactgttaga
gagaaacaagtactggaattaatagcatctttgaatatacaggttgacaatctctgtcaa
ttactaccacaagaccgggtacaagatttctctaagatgaatccacaggagttacttcgt
agtacattatctgcggtgggcggacaagagagtgtatctcagttggatgaattaatagag
tgcaggaataaacatagaggattgtctactaaagtacagaataatgctcaactattgcaa
gagcagatacgtctcaatgagagattaaaaacagtaattgatggaatgcatcagagaaaa
gagatagagaagcaaatagagatatgtgagaagaagaaactctggttggagtatcaaaca
cttagagaacaagttattgaatgcgagagagataagaaagaagctgtaaaacttgttaac
acacacaaaagtaaaatggaacctttagaaaaagtcatcgataaagctaaagtgggaatt
agtaaattggaacaggaaaaattatcagctaaccgtgaaataaattcactaaaagacagt
ataaaggaagctatcagttctgcccgacaacaagaatatactttgaaagatctggaagcg
gctctgcaagagaaaatagaacgacatcagaataaagagagagaattacttgaagctaat
gctaaattggaaaagttgaggaatgataagaaaatgttaattgaaaagatcggtgatgat
gtagtaagagcggatttcctggaaatctctataagcgagaacttcagattagagagaaac
ctccacaagcgagaactccgtttagagagaaacctctacaagcgagatcttcagtttaga
gagaaacctctacaatttcttaacctaattatatttttttacagaataaataacttagaa
aatgtagatgctaagcgactagaagttctaagagcctacagtgaggattgctacaaggcg
gtgatgtggctcagagagaataaacatatgttctcaagacctgtatatgaacctatcatg
ttagaaataaatttcacggatgcaaagttcgctcgttacctcgaagctacagtgccggcg
cgagatctcgcagctttcactttcgagagcagcgcagatatgaaccttttcctgcagaaa
gtgagacgagaacgcggtctgaagttagtcaatgctatttgcagttcgaatcctgcgaca
acacatagacctgatatcactcagcttagctacctaggtttttacacatatctaatagac
actataaacggtccggaacctatcatcaactatttgtgcagacagtatggaatacacagg
atacctataggaaatgatcatacatacaagaatagcgctaaagtaccctctaatattaca
catttctttactgaaaaccatagattcagtgtacgtgtgtcggcttacagcggtgtcaaa
agcagttctattatagagatacgtccggcgagacttttggctaacaccgtcgatgtcgac
caaatacatagccttaataaccaaagtataccggttaaattagattacaatagaaactcc
attgtacatgaggagagtaaactgagagaattgaaaaacgacatgacaaatgtacaggca
acattagaaaatatagagaatcaacttatccgtgttaaaacgaaagctaaagagaagcta
aacgaagcaaaaaggtcttgtaacaacaaactacctaatgaccccgactttcctcacact
gaagacttcgcagtactccctagtgagatcaatgaactcatgacacactgcttcgagctg
caggccagggtcaattgtatggatgaaggagacgagagggcaataaaagaatacgaagaa
cgtgaacagatgatagcaaagttgaaaaatgatgtggagagttcaggagatgtcagcaaa
caactagaaatcaaaatgaaccgtatcaaatcgaaatggttgccaccattagaagcgtta
cttcgtgatatagataaaacattcggcgatatgtttgagaagctcggctgtgcgggggaa
atcaaactggataaagctggagctgatgaggactacgacaagtacggtgtaagtatactg
gtgaggttccgcagctcggagcagttggcgcagctgacgagacatgcgcagtctgggggg
gagcgcgctctcaccaccgccatatacctcatggcgctgcagagacgcaccactgtaccc
ttcagatgcgtggatgaaatcaaccagggtatggacgcgatcaacgagcgcaagatgttc
cagcttctggtacaggtcaccaccgagtgtgataacgcccagtactttctgcttaccccc
aaattgctgactaatttagaatataattccaagataactgtgcacactatcatgaacgga
cctcgtgtgatgcatcacagcaagtggaagtgtcaacagtttattgataacgcaaggaaa
tatatgtcgactcagtaa
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