Papilio machaon (common yellow swallowtail): 106721383
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Entry
106721383 CDS
T05138
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac04140
Autophagy - animal
pmac04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106721383
04148 Efferocytosis
106721383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmac04131
]
106721383
Membrane trafficking [BR:
pmac04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106721383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
zf_RING_Vps8_fungal
Beta-prop_HPS5
zf-RING_Vps41
WD40_like
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Vps39_1
Beta-prop_EML_2
zf-RING_11
zf-RING_5
WDR55
RE_MamI
Gin
Motif
Other DBs
NCBI-GeneID:
106721383
NCBI-ProteinID:
XP_014371790
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MNMTLNQESCDNLSSDGEPKLKYDRMGNDVQNILVTDAVSCICVHTKFICLGTQWGVIHL
LDHEGNTVPFSQDNNQKDLQAHAIAVNKISVDENGDYIASCSDDGKVLVYGLYSKDNTHS
LTLSRVVKSVALDPFYHKSGSGRRFLTGDNKLTLYEKTFLNRLRSTVLCECESYVQAIAW
HDRFVAWASEVGVRVYDLVARCSLGLIQWEKSLNRSIEDFRCNLLWSAPKTLMIGWVDTI
RICLIRKRSPIELQTRDDTEYLVDPVYTFQSKEYFISGLGPLDDQLVLLSVPKEPDPETG
KSQRPILIVADYKDCEFNEFSADTLNIRGYEEYSCNDYFLDMLIEENRFFIVSPKEIIVA
SPYDIDDKVNWLTKKGEFERAIAVLDEVGGKTAQHSVVTVGVDYLDHLLTNQQYDAAAKI
CAKVCKNDKILWENQVLKFDAVKQLRAVSAYIPRISEQVLSPHIYELILNEYLKEDPQGF
LKLVKDWNPSLYRTGVIINWVLEHLLTTKVDNSVYLEALALLYCYQKKFDKALTTYLSLQ
HMDVFKLIKEHDMHTVIYDKILNLMQLDCDRAITILLEKFPVEHIDKQHGKTKIPVEVVE
KQLENHDLFLFKYLDSYSKIEPNGRYHGKLIHLYAKYARPKLLPFLRCSDNYPIQEALDV
CQSNEFYPEMVFLLSRIGNTREALQIIIEKLNDINQAINFCQEHNDKELWTDLIQQTVDK
PECVTLLLKRIGNYVDPRMLIQHIQPGCEIKDLKECLAKMMCDYHLQMSVQEACKVITLR
NYFDLHEKLIVGQQRGISVTDDFLCHVCQGRIIVRDLSNASNLIVYNCRHSFHIDCLPNG
ILCNNCYVCSAVKM
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgactttaaaccaagagagttgtgataacttgtcttcggacggggaaccgaag
ctaaaatatgatagaatgggtaatgacgttcagaatattttagtgactgatgctgtgagc
tgtatttgtgtgcatactaagtttatttgcctcggcacccaatggggagtcatacatcta
cttgaccatgaagggaacactgtgccgttttcgcaagacaacaatcagaaagacttgcaa
gcgcacgctatcgccgttaacaagatatctgtagatgagaatggagactatatagcgagt
tgttcggacgatggaaaagttttggtttatggcttatattccaaggacaatacacacagc
cttactttaagcagagttgtcaaatcagtggctttggatcctttctaccacaaatctgga
tctggtagaagatttcttacaggtgataacaaattaactctatatgagaagacattttta
aatcgccttcgcagcacagtactctgcgagtgtgagagctatgtccaagcaatagcctgg
catgaccggtttgttgcgtgggcaagcgaagttggtgtacgtgtttatgaccttgtggct
agatgttctctaggtcttattcaatgggaaaaaagtctgaatagatccatagaagatttt
cgttgcaatttactctggtctgcacccaaaactttgatgattgggtgggttgacacaata
agaatatgtctgatacgtaaacgaagcccaatcgagttacaaacgagagacgatacggaa
tacttagtagatcctgtttatacttttcaaagtaaggagtattttattagtggcctaggc
cctttggatgatcaactcgtactgctcagtgttccaaaggaacctgatccagaaactgga
aaatctcagagaccaattcttatcgtagcggattataaagactgtgaatttaatgaattt
tcagctgatactttaaacattcgaggttatgaagaatactcatgcaatgattacttttta
gacatgttaattgaagaaaatcgatttttcattgtatcacccaaagaaataatagttgcc
agtccgtatgacatagatgacaaagtaaactggctgaccaagaaaggagaatttgaaaga
gccattgcagtgttggatgaagttggtggcaaaactgcacagcactctgtagttactgtt
ggtgttgattatttggatcatttattaaccaatcaacaatatgatgcagcagcaaaaata
tgtgcaaaagtatgcaaaaatgataaaattttatgggagaaccaagttcttaaatttgat
gcagtaaagcaactgcgagccgttagcgcctacattcctcgcatttctgagcaagtatta
agtccacacatttatgaattaattttaaatgaatacctaaaggaagatccgcaaggattc
cttaaattagtaaaagactggaatccatctctatacagaactggtgtaattatcaactgg
gtactagaacatttactaaccaccaaagtggataacagtgtatatttggaagcattagcc
ttactttactgctaccaaaagaagtttgataaagcccttaccacctacttgagtttacaa
catatggatgtttttaaactgatcaaagagcatgacatgcataccgtaatatatgacaaa
attcttaatttaatgcaactggactgtgatagagccattaccattctactggagaaattt
cctgttgagcacattgacaagcaacacggcaagacaaaaataccagttgaagtagtggag
aaacagctagagaaccatgacttattcttgtttaaatatctagatagttacagcaaaatt
gaacccaacggaagataccatgggaagctcatccacttgtatgcaaagtatgcacggccc
aaattgttgccattcttaagatgcagcgacaactaccctattcaagaagctctagatgtt
tgtcaaagtaatgaattttatccagaaatggtgttccttttaagtaggatcggtaatacc
agagaagctttgcagattataatagagaagttaaatgatataaaccaagcaataaacttt
tgccaggagcataatgataaggagctgtggacagacctcatccagcagacagtggacaaa
cctgagtgtgtcacgttactactcaagcggataggtaactatgtagatccgcgcatgttg
attcagcacatacaacctggctgtgaaataaaggatcttaaggagtgtctcgctaaaatg
atgtgtgactaccatctccaaatgtcagtacaagaggcatgcaaagttataaccctcaga
aactatttcgatttacatgaaaaattgatagttggccaacagagaggtatatctgtgaca
gatgacttcttgtgccatgtttgtcaaggcaggatcatagtgcgggacttgtctaatgcc
tcaaacctcatagtttacaattgtaggcattcattccacatagattgtctacccaatggt
atattgtgtaacaattgttatgtgtgcagtgcagttaagatgtga
DBGET
integrated database retrieval system
