Papilio machaon (common yellow swallowtail): 106721752
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Entry
106721752 CDS
T05138
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03013
Nucleocytoplasmic transport
pmac03015
mRNA surveillance pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106721752
09122 Translation
03013 Nucleocytoplasmic transport
106721752
03015 mRNA surveillance pathway
106721752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106721752
03041 Spliceosome [BR:
pmac03041
]
106721752
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106721752
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106721752
Spliceosome [BR:
pmac03041
]
Complex C
Other components
EJC/TREX
106721752
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106721752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106721752
NCBI-ProteinID:
XP_014372283
UniProt:
A0A194RSI8
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADHQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LGQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgacgatcttctcgactacgaagatgaagagcaggcagatcaccaaacc
gccgacggagcaacggaagcggcgccaaaaaaagaggttaagggatcttacgtatcgatt
cacagttctggatttagagattttctcttgaagcctgaaattttaagagctatagtggat
tgcggtttcgagcatccttcagaagtccaacatgaatgtattccacaagccgttctcgga
atggatattttatgccaagcgaagtccggtatgggtaaaactgccgtgtttgtcctagca
accctccaacaactagaaccgtccgaaaatcatgtttacgttttggtcatgtgccatacc
agagagctagcttttcagataagtaaagaatatgagcgtttttcaaagtatatggcgggt
gtacgtgtgtccgttttcttcggtggtatgccgatacagaaggacgaagaagtactaaaa
accgcatgccctcacatcgtggttggaacgccgggaagaatactggcactggtaaatagt
aagaagttaaaccttaaacatctgaagcattttattctcgatgagtgtgacaaaatgtta
gaatcattggacatgcgacgtgatgtacaggagatattcagaaacacccctcacgggaag
caagtaatgatgttttctgctacattgagtaaagaaattcgaccagtttgcaagaagttt
atgcaggatcctatggaagtgtatgtagatgatgaagccaaattaactctgcatggactt
caacagcattatgtcaaactgaaggagaatgagaagaacaaaaaactctttgaacttctc
gatgtgctggagttcaatcaagtagtaatatttgttaaatcagtgcagcgctgcatagca
cttggtcagctacttacagatcaaaacttcccagcaatcggtattcatcgcaacatgacc
caagacgagcgcttatcccggtaccagcagttcaaggatttccagaagaggattctagtt
gcaactaacttatttggtcgtggcatggatattgagagagttaacattgtcttcaactac
gacatgccagaggattcagacacctatcttcaccgagtagcccgtgcgggaagatttggt
acaaaaggcttagctataactatggtatctgatgaaaatgatgcaaagatcctgaatgaa
gtgcaagacagatttgatgtcaatataacagagctgcccgaggagattgaattgtcaaca
tacattgaaggacgatag
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