Prauserella marina: BAY61_04705
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Entry
BAY61_04705 CDS
T04988
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmad
Prauserella marina
Pathway
pmad03420
Nucleotide excision repair
pmad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAY61_04705
03430 Mismatch repair
BAY61_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmad03400
]
BAY61_04705
Enzymes [BR:
pmad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAY61_04705
DNA repair and recombination proteins [BR:
pmad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAY61_04705
MMR (mismatch excision repair)
Other MMR factors
BAY61_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASR34408
LinkDB
All DBs
Position
1052484..1054571
Genome browser
AA seq
695 aa
AA seq
DB search
MGSVLASNRRADLLEGLDPEQRAAACAPRGPVCVLAGAGTGKTRTITHRIAYLVNTGHVA
AGQVLAVTFTARAAGELRSRLRPLGVDAAQARTFHAAALRQLRYFWPRVVGDRQWDLIEG
NKLRLVGQAAHRLGLPTEFEVLRDLASEIEWAKASLISPDDYPATVARLSRDIPESAERL
AELYRGYERIKNEAQLLDFDDLLLHTTAALEEHRGVAEEFRDRYRCFVVDEYQDVTPSQQ
RLLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLDFTRRFPHATVVRLERDYRSTPQVV
ELANKVIGAARGRPAGSRLSLIGQRADGPPPRFAEYDDEVAEANAAAGRIRELLDTGVAA
SEIAVLYRINAQSEVYEQALSEAEIPYLVKGGERFFARREVRQAVAALRTAAAGDPGGDL
VILVRKVLATVGLTEQPPPGGAAKERWDALLALVELAEELATAVEGATLAKYVSELDQRA
AAQHPPTVEGVTLASLHAAKGLEWDAVFLVGLAEGTMPILHADGDDEAIEEERRLFYVGV
TRAREYLSLSWALSRNPGGRRNRRRSRFLYGLVPEGHPAARVARAKATSTGPKVRCRVCG
CALIATMDIKLGRCGKCPADVDEDLLTRLKEWRVERARELKVPAFVVFTDATLVAIAEQR
PTDDSALVSISGIGATKLDRFGAEILAVVKASDAE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagtgtgcttgcgtcaaaccgtcgtgcagacctcctcgaaggtctcgatccggaa
caacgcgccgccgcctgcgcacctcgggggcccgtatgcgtgctcgctggcgcgggcacc
ggcaagacgagaaccatcactcatcgcatcgcttacctggtcaacaccggccacgtcgcg
gcaggccaggttctcgcggtcaccttcaccgcgcgggcggctggtgaactgcgatcccgg
ctgcggccactcggcgtcgacgccgcacaggcccgcacctttcacgccgcggcgctgcga
caactccggtacttctggccacgggtcgtcggcgaccggcaatgggacctcatcgaaggg
aacaagctccgcctggtcggccaagccgctcaccggctcggtctgccgaccgagttcgaa
gtgctccgcgatctcgccagtgagatcgaatgggcgaaggcgtccctcatcagccccgac
gactacccggcaacggtggcgcgcctcagcagggacatccccgagtccgccgagcggctc
gccgagctctatcgcggatacgagcggatcaagaacgaagcccagctcctcgacttcgac
gacctccttctgcacaccaccgccgcacttgaggagcacaggggagtcgccgaggaattc
cgcgaccggtaccgctgcttcgtcgtcgacgagtaccaggacgtcacaccgtcccagcag
cggctcctcgacgcgtggctcggtggcagggacgacctgaccgtcgtcggcgacgccaac
cagacgatctactccttcggtggcgcgtcaccgcgtccgctgctggatttcacgcgccgc
ttcccccacgccaccgtggtacgccttgagcgggactaccggtcaaccccacaggtcgtc
gaactggccaacaaggtcatcggcgcggcgagaggcaggcccgcgggctcaaggctcagc
ctcatcgggcagcgcgcggacgggccaccacctcgcttcgccgaatacgacgacgaggtc
gccgaggccaacgcggccgcgggccggatcagggaactgctcgacaccggggtcgccgcg
agtgagatcgccgtgctctaccggatcaacgcgcagtccgaggtttacgaacaagccctg
tccgaggccgagattccctacttggtgaagggcggtgagcgattcttcgcccgcagagaa
gtaaggcaagccgtcgcggcgttgcgtaccgcggccgcgggggatccgggaggcgacctg
gtgatccttgtacggaaggtgctggcaacggtcggcttgaccgaacagcctccgccaggt
ggcgccgcgaaggaacgctgggatgcgctgcttgccctcgtcgagctcgccgaagaactc
gcgacggccgtggagggtgcgactctggccaagtacgtgtccgagctcgaccagcgggcg
gccgcccagcatccgcccacggtcgagggagtcaccctggcgtcgttgcacgcggcgaag
ggcctcgaatgggacgcggtgttcctcgtcgggctcgccgagggaaccatgccgatcctg
cacgccgacggtgacgacgaggccatcgaggaggaacgacggctcttctatgtcggcgtc
acccgcgcgcgggagtacctctcgttgagctgggcgctctcccggaatcccggcggcagg
cgcaatcgcaggcgaagccggttcctgtacggcctcgtccccgagggacaccccgccgcg
cgcgtcgctcgcgccaaggccacctcgaccgggcccaaagtgcgatgcagagtgtgtggc
tgcgcgctcatcgcgacgatggacatcaagctcggccggtgcgggaagtgcccagccgac
gtggatgaggacttgctgacgcggctcaaggagtggcgggtcgagcgggcgcgcgaactc
aaggtccccgcgttcgtcgtattcaccgacgccacgctcgtcgcgatcgccgagcagcgg
cccactgacgacagcgcgctcgtctcgatatcgggcatcggcgcgaccaaactcgaccgg
ttcggagcggagatccttgccgtggtcaaagccagcgacgctgagtag
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