KEGG   Prauserella marina: BAY61_11150
Entry
BAY61_11150       CDS       T04988                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
pmad  Prauserella marina
Pathway
pmad02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pmad00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BAY61_11150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmad03021]
    BAY61_11150
Transcription machinery [BR:pmad03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BAY61_11150
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_20
Other DBs
NCBI-ProteinID: ASR35464
UniProt: A0A222VNL4
LinkDB
Position
complement(2428424..2429830)
AA seq 468 aa
MIDRCERAYVAAAKTATRSGTKTTSAAKQATAEDTEAAANGTATPDANAPDSKSAAKKAP
AKSRKNAKTGKSSTKGEAGQSSELGEDIDASELEDVDLADLEVESVEVDVVDATVTEETE
ESEGEEEASSGTKPRSSNDPDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVAL
LNAEEEVELAKRIEAGLYAAERVRVAEDEGEKLTTQMRRDLKWIVRDGERAKSHLLEANL
RLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMA
DQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDISPEKVLEIQQYAREP
ISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLQTLSEREAGVVRLRFG
LTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgatcgaccgctgcgaaagggcgtacgtggcagccgcaaagaccgcaacccgaagcggg
acgaagacaacgagcgccgccaagcaagcgacagccgaggacaccgaggcggccgcgaac
gggacggccacgccagacgcgaacgcgccggattccaagtcggccgcgaagaaggcgccc
gcgaagtcccgcaagaacgccaagaccggcaagtccagcaccaagggcgaagccggtcag
tcctccgagctcggcgaggacatcgacgcttccgaactcgaggacgtcgatctggccgac
ctcgaagtggaatcggtggaggtcgacgtcgtcgacgccacggtgaccgaggaaacggag
gagagcgagggcgaggaagaggccagcagcggcaccaagccccggtcctccaacgatccc
gacttcgtctgggacgaggaggagtcggaggcgctgcggcaggcccgcaaggacgccgag
ctcaccgcgtcggccgactcggttcgtgcctacctcaagcagatcggcaaggtcgctctg
ttgaacgccgaggaggaggtcgaactcgccaagcgcatcgaggccggcctctacgcggcg
gaacgagtcagggtcgccgaggacgaaggcgagaagctcaccacccagatgcggcgcgac
ctcaagtggatcgtgcgcgacggtgagcgggccaagagccacctgctcgaagcgaacctg
cggctcgtggtgtcgctggccaagcgctacaccggccgtggcatggccttcctcgacctg
atccaagagggcaacctcggcctgatccgcgccgtcgagaagttcgactacaccaagggc
ttcaagttctccacctacgccacctggtggatcaggcaggccatcacccgcgccatggcc
gaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtgatcaacaagctcggc
cggatccagcgcgaactcttgcaggacctcggccgcgagccgactccggaagagctcgcc
aaggagatggacatctcgccggagaaggtactggagatccagcagtacgcgagggagccg
atctcgctcgaccagacgatcggcgacgagggcgactcgcagctcggtgacttcatcgag
gacagcgaggccgtggtcgccgtcgacgccgtgtcgttcacgctgctccaggaccagctc
cagtcggtgcttcagacgctgtcggagcgcgaggccggtgtggtgcggctgcggttcggc
ctcaccgacggacagccgaggactttagacgagatcggccaggtctacggcgtgacccgc
gagcggatccggcagatcgagtccaagaccatgtccaagctgcggcacccttcgcggtcg
caggtccttcgcgactacctggactga

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