Prauserella marina: BAY61_24455
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Entry
BAY61_24455 CDS
T04988
Name
(GenBank) heavy metal transporter
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmad
Prauserella marina
Pathway
pmad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAY61_24455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmad03019
]
BAY61_24455
03009 Ribosome biogenesis [BR:
pmad03009
]
BAY61_24455
Enzymes [BR:
pmad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAY61_24455
Messenger RNA biogenesis [BR:
pmad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAY61_24455
Ribosome biogenesis [BR:
pmad03009
]
Prokaryotic type
rRNA helicases
BAY61_24455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASR39620
LinkDB
All DBs
Position
complement(5356905..5358557)
Genome browser
AA seq
550 aa
AA seq
DB search
MHLRAELLTALSELGYEEPTPIQRAAIPSLLAGRDLVGQAATGTGKTAAFALPTLQRITG
RGKRDTGKKGPAALVLVPTRELAVQVCEAMHRYGHKMGSRVVPIYGGQPIVRQMKALERG
VDVAVATPGRVLDHLARGTLSLSDIEVVVLDEADEMLDMGFAEDIEAILQETPDERQTML
FSATMPPRITGMVRRYLTDPERIELGKKASTDGETAKVRQTAYVVPKGHKPAALGRVLDV
EAPTAAVVFCRTREEVDRLTSTLNGRGYRAEALHGGMDQSQRDRVVGRLRSASTDLVVAT
DVAARGLDIDQLTHVVNFDVPSAPDVYVHRIGRVGRAGREGTAITLAEPREHRMLKTIER
VTGQRLAVQKLPTIADLRAQRLEQTRAALWENLQEENLDRFRAVVEPLAEEYDVVEVALA
AVKLAHEAGGVVSEEEEIPEVTSWPPDERRGRKDRGGKEQRRPRAAASGMTRLFVGVGRH
AGVRPQDLVGAIAGESRLRGRDIGAIEIADRFSLVDVPDSAAEDVISALRGSTIKGRKAT
IRRERFTKGR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ctgcacctgcgggcggagttgctgaccgcgttgtccgaattgggctacgaggagccgacc
ccgattcagcgggccgcgatcccttcgctgctcgccggtcgtgatctcgtcggccaggcc
gccacgggaaccggcaagaccgcggcgttcgcgttgccgacgttgcagcggatcaccggg
cgcggcaagcgggacaccggaaaaaagggtcccgccgcgctcgtgctggtgccgacgagg
gagctggccgtccaggtttgcgaggccatgcaccggtacggccacaagatggggagcagg
gtcgttcccatctacggcggccagcccatcgtcaggcagatgaaggcgctggaacgcggt
gtcgacgtcgccgtcgcgacgccgggcagggtgctcgatcacctcgcgagggggaccctc
tcgctcagtgacatcgaggtcgtcgtgctcgacgaggccgacgagatgctggacatgggc
ttcgcggaggacatcgaggcgatcctccaggagacccccgacgagcggcagacgatgttg
ttctcggccaccatgccaccgcgaatcaccggtatggtccgccgctatctcaccgatccc
gagcgcatcgaactcggcaagaaggcctcgaccgacggcgagacggcgaaggtgcggcag
accgcctacgtcgtcccgaagggacacaagccggccgcgctcggcagggtgctcgacgtc
gaggcgccgaccgctgccgtcgtcttctgccgcacgagggaagaggtcgaccggctcacc
tcgaccctgaacggtcgtggctaccgggccgaggccctgcacggcggcatggatcagagc
cagcgggacagggtcgtcgggcggttgcgcagtgcctcgaccgacctcgtcgtggccacc
gacgtcgcggcgcgcgggctcgacatcgaccagctcactcacgtcgtcaacttcgacgtg
cccagcgcgccggatgtctacgtgcaccgcatcggcagggtggggcgagcaggcagggaa
ggcaccgccatcaccctcgccgagccgcgcgaacaccggatgctgaagacgatcgagcgg
gtcaccggtcagcgcctcgcggtgcagaagctcccgaccatcgccgaccttcgcgcgcag
cgcctcgaacagacaagggccgcgttgtgggagaaccttcaggaggagaacctcgaccgg
ttccgcgccgtcgtcgaaccgcttgccgaggagtacgacgtcgtcgaggtggccctggca
gccgtgaagctggcccacgaggcgggcggcgtggtgagcgaggaagaggaaatccccgag
gtgacctcgtggccgcccgacgagcgcaggggccgcaaggaccgtggtggcaaggagcag
cggcgcccgagggccgcggcgtccgggatgacgaggctcttcgtcggagtcggccgccat
gccggtgtccggccacaggacctggtcggtgccatcgcgggtgagtcgaggctcaggggc
cgcgacatcggtgccatcgagatcgccgaccggttctcccttgtggacgtacccgattcg
gcggcggaggacgtgatttccgcgctgcgtggcagcaccatcaagggcaggaaggcaacc
atccgcagggagcgcttcaccaagggacggtag
DBGET
integrated database retrieval system
