KEGG   Prauserella marina: BAY61_25565
Entry
BAY61_25565       CDS       T04988                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pmad  Prauserella marina
Pathway
pmad00300  Lysine biosynthesis
pmad00470  D-Amino acid metabolism
pmad01100  Metabolic pathways
pmad01110  Biosynthesis of secondary metabolites
pmad01120  Microbial metabolism in diverse environments
pmad01230  Biosynthesis of amino acids
Module
pmad_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmad00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BAY61_25565
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BAY61_25565
Enzymes [BR:pmad01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BAY61_25565
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ASR37813
UniProt: A0A222VVR4
LinkDB
Position
complement(5577241..5578680)
AA seq 479 aa
MCAHPAGPRHAEVYPHVDQAGFPPSTSDELDRLYPKVWPRNTYRAPDGVVRIAGVDVREL
ARTYSTPLFVIDEADFKARCAEYAAAFEDASLVHYASKAFLCTEIARWVAAQGLSLDVCS
GGELVIAQRAEFPAERITFHGNNKSVAELEAALDAGVGTIVLDSFYEIARLADLAARRDI
VQSVLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNSPSLALTGLHSHI
GSQIFDADGFEVAARRVIGLIAELHKEHGTKALEQLTVVDLGGGFGIAYTDKDNPPPPAQ
MVTQIREIVRKECEFADLPVPRIAGEPGRAIAGPGTVTLYEVGTIKDVSLGDETARRYVS
VDGGMSDNIRTALYDAAYDVRLVSRSSSDGQPEPVSALLSRVVGKHCESGDIVVRDCWLP
DTLAPGDLLAVAATGAYCYSMASNYNRQPRPAVVAVRNGSHRLLLRRETDEDMLRLEAL
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtgcgctcaccccgcggggccgcggcacgccgaggtttacccgcacgttgaccaagcc
ggattccctccgtccacttcggacgagctggatcgactctatcccaaggtgtggccgcgc
aacacgtatcgcgcgccggacggcgtcgtgcggatcgccggcgtcgacgtgcgcgaactg
gcgcgaacgtacagcaccccgcttttcgtcatcgacgaggccgacttcaaggcgaggtgc
gccgagtacgcggctgctttcgaggacgcctcgctcgtgcactacgcgtcgaaggcgttc
ctgtgcacggagatcgcccgctgggtcgccgcgcaggggctgagcctcgacgtgtgcagc
ggcggcgagctggtcatcgctcagcgcgcggagttcccggccgagcgcatcaccttccac
ggcaacaacaagtcggttgccgagctggaggccgcgctggacgcgggggtcggcacgatc
gtgctcgactcgttctacgagatcgcgaggctcgccgatctggcggccaggcgcgacatc
gtgcagtccgtcctggtgagggtcacggtcggcgtcgaggcgcacacgcacgagttcatc
gcgaccgcgcacgaggaccagaagttcgggttctcgcttgcttccggtgatgcggccgaa
gccgtcaggagggtgctgaactcgccatcgctggcgctgaccggcctgcacagtcacatc
ggctcgcagatcttcgacgccgacgggttcgaggtcgccgcgcgcagggtcatcgggttg
atcgccgagctgcacaaggaacacggtacgaaggcgctggaacagctcaccgtcgtcgac
ctcggtggtggtttcggcatcgcgtacaccgacaaggacaacccgccgcccccggcgcag
atggtcacccagatcagggagatcgtgcgcaaagagtgcgagttcgccgaccttcccgtg
ccgaggatcgcgggggagccgggaagggccatcgccggtcctggcacggtcacgctgtac
gaggtgggcaccatcaaggacgtgtcactcggcgacgagaccgcgcgcaggtacgtgagt
gtcgacggcggcatgagcgacaacatccgcaccgcgctctacgacgctgcctacgacgtc
aggctcgtctcgcgaagcagcagcgacggccagccggagccggtgtcggccctgctgtcc
cgggtcgtgggaaagcactgtgagtccggcgacatcgtcgtccgtgactgctggttgccc
gacacccttgctcctggggacctgctcgcggtcgcggcgaccggtgcctactgctactcg
atggcgagcaattacaaccgccagcctcggcctgccgttgtcgcggtgcgcaacgggagt
caccggttgctgctccggcgggagacggacgaggacatgctgcggctggaggctctgtga

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