Prauserella marina: BAY61_25565
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Entry
BAY61_25565 CDS
T04988
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pmad
Prauserella marina
Pathway
pmad00300
Lysine biosynthesis
pmad00470
D-Amino acid metabolism
pmad01100
Metabolic pathways
pmad01110
Biosynthesis of secondary metabolites
pmad01120
Microbial metabolism in diverse environments
pmad01230
Biosynthesis of amino acids
Module
pmad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAY61_25565
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BAY61_25565
Enzymes [BR:
pmad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BAY61_25565
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASR37813
UniProt:
A0A222VVR4
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All DBs
Position
complement(5577241..5578680)
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AA seq
479 aa
AA seq
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MCAHPAGPRHAEVYPHVDQAGFPPSTSDELDRLYPKVWPRNTYRAPDGVVRIAGVDVREL
ARTYSTPLFVIDEADFKARCAEYAAAFEDASLVHYASKAFLCTEIARWVAAQGLSLDVCS
GGELVIAQRAEFPAERITFHGNNKSVAELEAALDAGVGTIVLDSFYEIARLADLAARRDI
VQSVLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNSPSLALTGLHSHI
GSQIFDADGFEVAARRVIGLIAELHKEHGTKALEQLTVVDLGGGFGIAYTDKDNPPPPAQ
MVTQIREIVRKECEFADLPVPRIAGEPGRAIAGPGTVTLYEVGTIKDVSLGDETARRYVS
VDGGMSDNIRTALYDAAYDVRLVSRSSSDGQPEPVSALLSRVVGKHCESGDIVVRDCWLP
DTLAPGDLLAVAATGAYCYSMASNYNRQPRPAVVAVRNGSHRLLLRRETDEDMLRLEAL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctcaccccgcggggccgcggcacgccgaggtttacccgcacgttgaccaagcc
ggattccctccgtccacttcggacgagctggatcgactctatcccaaggtgtggccgcgc
aacacgtatcgcgcgccggacggcgtcgtgcggatcgccggcgtcgacgtgcgcgaactg
gcgcgaacgtacagcaccccgcttttcgtcatcgacgaggccgacttcaaggcgaggtgc
gccgagtacgcggctgctttcgaggacgcctcgctcgtgcactacgcgtcgaaggcgttc
ctgtgcacggagatcgcccgctgggtcgccgcgcaggggctgagcctcgacgtgtgcagc
ggcggcgagctggtcatcgctcagcgcgcggagttcccggccgagcgcatcaccttccac
ggcaacaacaagtcggttgccgagctggaggccgcgctggacgcgggggtcggcacgatc
gtgctcgactcgttctacgagatcgcgaggctcgccgatctggcggccaggcgcgacatc
gtgcagtccgtcctggtgagggtcacggtcggcgtcgaggcgcacacgcacgagttcatc
gcgaccgcgcacgaggaccagaagttcgggttctcgcttgcttccggtgatgcggccgaa
gccgtcaggagggtgctgaactcgccatcgctggcgctgaccggcctgcacagtcacatc
ggctcgcagatcttcgacgccgacgggttcgaggtcgccgcgcgcagggtcatcgggttg
atcgccgagctgcacaaggaacacggtacgaaggcgctggaacagctcaccgtcgtcgac
ctcggtggtggtttcggcatcgcgtacaccgacaaggacaacccgccgcccccggcgcag
atggtcacccagatcagggagatcgtgcgcaaagagtgcgagttcgccgaccttcccgtg
ccgaggatcgcgggggagccgggaagggccatcgccggtcctggcacggtcacgctgtac
gaggtgggcaccatcaaggacgtgtcactcggcgacgagaccgcgcgcaggtacgtgagt
gtcgacggcggcatgagcgacaacatccgcaccgcgctctacgacgctgcctacgacgtc
aggctcgtctcgcgaagcagcagcgacggccagccggagccggtgtcggccctgctgtcc
cgggtcgtgggaaagcactgtgagtccggcgacatcgtcgtccgtgactgctggttgccc
gacacccttgctcctggggacctgctcgcggtcgcggcgaccggtgcctactgctactcg
atggcgagcaattacaaccgccagcctcggcctgccgttgtcgcggtgcgcaacgggagt
caccggttgctgctccggcgggagacggacgaggacatgctgcggctggaggctctgtga
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