Prauserella marina: BAY61_27550
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Entry
BAY61_27550 CDS
T04988
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmad
Prauserella marina
Pathway
pmad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAY61_27550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmad03019
]
BAY61_27550
03400 DNA repair and recombination proteins [BR:
pmad03400
]
BAY61_27550
Enzymes [BR:
pmad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAY61_27550
Messenger RNA biogenesis [BR:
pmad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAY61_27550
DNA repair and recombination proteins [BR:
pmad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAY61_27550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ASR38141
UniProt:
A0A222VWP8
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All DBs
Position
5999456..6001261
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AA seq
601 aa
AA seq
DB search
MTSPETLQVLNRVFGYDSFREGQQEIIDHVAGGGDALVLMPTGGGKSLCYQIPSLVREGV
GVVISPLIALMQDQVDALRALGVRAGFLNSTQDPGERRMVEAEFLAGELDLLYLAPERLK
VDATVALLDKGSVALFAIDEAHCVSQWGHDFRPDYLALSSLHERWPEVPRIALTATATKA
THAEITQRLKLEEAHHFVASFDRPNIQYRIAPKNEPRKQLLDLVRNEHAGEAGIVYCLSR
KSVEDIAEFLVRNGIDAVPYHAGLDAGTRAEHQARFLREDGLIVVATIAFGMGIDKPDVR
FVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKLIDNSEGDVAHRRKQS
AHLDAMLALCEAVECRRVQLLGYFGQSATPCGNCDTCLAPPESWDGTVAAQKLLSTVVRL
RRERRQKFGAGQIIDILLGKKTSKVTQHSHDELSVFGIGTELSEPEWRGVVRQLLAKGLL
AVEGDYGTLVTTGESDEVLYRGRKVLLRTEPKRAAKQAKPRRAEAAELSEEAAPVFERLR
AWRAATAKEQGVPAYVIFHDATLRQIATDRPSSMAELGAVSGVGESKLAKYGEQVLETVG
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcccccgagacactgcaagtactgaaccgggtcttcggttatgactcgttccgg
gaaggccagcaggagatcatcgatcacgtcgcgggtggcggcgacgcactcgtgctcatg
ccgaccggcggcggcaaatcgctgtgctaccagattccctcgttggttcgcgagggtgtc
ggcgtcgtgatctcgccgctcatcgcgctcatgcaggaccaggtcgatgctctacgggca
ctcggcgtgcgggctggtttcctcaactcgacccaggaccccggcgaacgcaggatggtc
gaggccgagtttttggccggcgaactggacctgctctacctcgcccctgaacggctgaag
gtcgatgccaccgtcgctctgctcgacaagggttccgtcgcgttgttcgcgatcgacgag
gcacactgtgtttcccagtggggtcacgacttccggccggattacctcgcgttgtcgagt
ctgcacgagcggtggccggaggtgccgcgcatcgcgttgacagccacggcgacgaaggcg
acgcacgcggagatcacgcagcggctcaagctcgaagaggcccaccatttcgtcgcgagt
ttcgaccggccgaacatccagtaccggatcgcgccgaagaacgagccccgcaagcagttg
ctcgacctggtccgcaacgagcacgcgggcgaagcggggatcgtgtactgcctgtcccgc
aagtccgttgaggacatagcggagttcctggtacgcaacggtatcgacgccgtgccctac
cacgctggactcgatgcgggaaccagggcagagcatcaggcccggttcctgcgcgaggac
ggtctcatcgtcgtggccaccatcgccttcggcatggggatcgacaagccggacgtgcga
ttcgtcgctcacctcgatctcccgaagtcggtggagggctactaccaggaaaccggtagg
gccggcagggacgggctgccttcgacggcctggctcgcctacggtctccaggacgtcgtc
cagcagcgcaagctcatcgacaattccgaaggcgacgtcgctcaccgccgcaagcagagc
gcgcatctcgacgcgatgctcgcgctgtgcgaagcggtggagtgcaggcgggttcagctg
ctcggctacttcggccagagcgcgacgccgtgcggcaactgcgacacctgtctcgctcct
cccgagtcgtgggacggaacggtcgcggcgcagaaactgttgtccaccgtggtgcggttg
cgcagagaacggcggcagaagttcggtgccgggcagatcatcgacatcctgctcggcaag
aagaccagcaaggtcacccagcacagccacgacgagctgagcgtgttcggcatcggtacc
gagctttccgagccggaatggcgaggcgtcgtgcggcaactgctcgcgaagggactactg
gccgtcgagggcgactacgggacgctggtgacgacgggcgaaagcgacgaggtcctatac
cggggcagaaaagtactgctgcgcaccgaaccgaagcgcgccgcgaaacaggcgaagccg
cgtcgcgccgaggccgccgaactgtcggaggaagcggcccctgtcttcgaacggttgcgg
gcatggcgcgccgcgacggcgaaggaacagggtgtccccgcgtacgtcatcttccacgac
gcgacgttgcggcagatcgcgaccgaccggccttcgagcatggccgaactgggcgcggtg
agcggcgtcggggagagcaagctggccaagtacggcgagcaggtgctggagacggtcggc
ggatag
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