Paenibacillus macerans: LMZ02_00400
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Entry
LMZ02_00400 CDS
T09394
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmae03021
]
LMZ02_00400
Transcription machinery [BR:
pmae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMZ02_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Tnp_ISL3
HTH_50
HTH_38
HTH_29
MarR
HTH_36
MarR_2
Cyclophil_like2
KORA
HTH_28
HTH_24
Sigma70_ECF
HTH_3
DUF1492
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
UMV47921
LinkDB
All DBs
Position
complement(71312..72085)
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AA seq
257 aa
AA seq
DB search
MTEKQTPHESWQAAVCLIRVYQETKDNEVATELIRKYDPMVKTAASKIARNRPDLYEDLY
QVGEMALIRLLQQYDTSLGIPFEPYAMKSMIGHMKNYLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVKLERSPNVKDIAEYLELSVEETVEVLAGRECYHYVSLDSPLSQEESAATLGEL
LSSETNDYEALEKRMDLQQALSFLKMQEQQVLLLAFQEGQSQRTIARKLGMSQMSVSRIQ
KRATEKLKQIMDQMNAH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaagcagactccccatgagtcgtggcaagcagcggtttgtctgatcagagtt
tatcaagaaacgaaggacaatgaagtcgcgacggaattgatccggaaatacgatcccatg
gtcaaaacggccgccagcaaaattgcccggaaccggcccgatttgtatgaagacctgtat
caggtgggagaaatggctctgatccggctgcttcagcagtatgacaccagcctcggcatt
ccgtttgagccttatgcgatgaaaagcatgattgggcacatgaaaaattatttgcgggac
aagtcctggtatatccaggtgccgcgcagaatcaaggaaaaaggcgcgcttgtgcagcag
gccatcgacgagttgaccgtaaagctcgaacgttcgcccaacgtcaaagatatcgccgaa
tatttggagctgtcggtggaggaaacggtcgaagtgcttgccggacgcgaatgctatcat
tatgtgtctctggattcgccgctttcccaggaggaaagcgcagcaacgctgggagaactg
cttagctcggaaacgaatgactatgaagcattggagaaaaggatggatttgcagcaggcg
ctttcgtttttgaaaatgcaggaacagcaggtgctgctgcttgcttttcaggaggggcag
tcgcaaagaacgatcgcccgcaagctgggcatgtcccagatgagcgtttcccgcatccag
aaacgggcgacggagaagctcaaacaaattatggaccaaatgaacgcgcattaa
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