Paenibacillus macerans: LMZ02_01715
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Entry
LMZ02_01715 CDS
T09394
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pmae
Paenibacillus macerans
Pathway
pmae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMZ02_01715 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_01715 (uvrB)
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMZ02_01715 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMZ02_01715 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
AAA_25
AAA_22
AAA_16
HerA_C
HEM4
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UMV48152
LinkDB
All DBs
Position
complement(358182..360176)
Genome browser
AA seq
664 aa
AA seq
DB search
MSEIVFSDNKFELVSEFTPQGDQPEAVRQLVEGIRAGKRHQTLLGATGTGKTFTIANTIA
QIGKPTLIIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPMEYRNLVLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVLEIFPASKGEHAVRVEFFGDEIERITEIDVLTGEL
VGEREHVAIFPASHFVTQEETMRIALANIERELEERLEELRSKGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFRERGATPYTLLDYFPDDFLIVIDESHQTLPQIRAMYNGD
QARKTVLVEHGFRLPSALDNRPLRFEEFEAKAKQLIYVSATPGPYELEHCNTMVQQIIRP
TGLLDPVIEVRPTKGQIDDLIGEIQSRIDKDERVLVTTLTKKMAEDLTDYLKEIGIKVRY
LHSDIKTLERMSILRDLRLGTFHVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNADGRVLMYADSITESMDKAIKETERRRSIQIAYNEKHGITPQTIRKKVRD
VIEATKVAESKSEYLADAAKVKMSKRDREAMIRRLEAEMKEAAKNLQFERAAELRDAIME
LKAE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattgtatttagcgataataaattcgagcttgtctccgagttcactccgcaa
ggggatcagccggaggccgtaaggcagctcgtcgagggcattcgcgccgggaaaagacac
cagacgctgcttggcgcgaccggaacgggcaagacgtttacgatcgccaatacgattgcc
cagataggcaagccgacgctgatcatcgcccataacaagacgctggcggcgcagctggcc
agtgaatttaaagaatttttccccaacaactcggtagactatttcgtcagctattacgac
tattatcaaccggaagcctacatcccttcctccgatacctacatcgagaaagactccagc
atcaacgaagagatcgataagttgcgccactccgcgacaagctcgctgtttgagcggcgg
gacgtcatcattgtggcgagcgtgtcgtgcatctacggcctcggttcgccgatggaatac
cgcaacctggtgctgtcgctgcgggttggcatggagaagccgcgcaaccagattttgagc
cggctggtggatatccagtaccagcggaacgacatcaacttcgtgcgcggtacgtttcgg
gtgcgcggggacgtgctggagatttttccggcttccaaaggggagcacgccgtacgggtg
gaatttttcggcgatgaaatcgaacggatcacggaaatcgacgtgctgaccggcgaattg
gtcggcgagcgcgagcatgtggcgattttcccggcatcccacttcgttacgcaggaggag
acgatgcggatcgcgctcgccaacatcgagcgtgagctggaggagcggctggaagagctt
cgttccaaaggaaagctgctggaggcccagcggctggagcagcggacgcgctacgacatt
gagatgatgaaggaagtcggcttttgctccgggatcgaaaactattccgggccgctgacg
ttccgcgagcggggggctaccccgtatacgctgctggattattttcccgacgacttcctg
attgtgatcgacgaatcccaccagacgctgccgcaaatccgggcgatgtacaacggcgac
caggcgcgcaaaacggtgctggtggagcacggcttccgcctgccttcggcgctggacaac
cggccgctgaggttcgaggagttcgaagccaaggcgaagcagttgatttacgtatccgcg
acgccgggaccttacgagctggagcattgtaatacgatggtgcagcagatcatccggccg
acgggccttttggatccggtgatcgaggtgcggccgacgaaggggcagatcgacgacctg
atcggcgaaattcagagccgtatcgacaaggatgagcgtgtgctcgtgacgaccttaacg
aagaaaatggccgaggatttgaccgactatttaaaagagatcggcatcaaagtaaggtac
cttcattccgatatcaaaacgctggagcggatgagcattttgcgcgacttgcggctgggc
acgttccatgtgctgatcggcatcaacctgctgcgcgaagggttggatttgccggaagtg
tcgctggtggccattctggacgccgacaaggaaggcttcctgcggtcggagcgctccctg
atccagacgatcgggcgggcggcccggaacgcggacggccgggtgctgatgtacgctgac
agcatcacggaatcgatggacaaggcgattaaggaaaccgaacggcggcgcagcatccag
atcgcttacaacgagaagcacggcattacgccgcagacgatccgcaagaaagttcgcgac
gtgatcgaagcgaccaaggtggcggagagcaagagcgagtatctggccgacgccgccaag
gtcaagatgtccaagcgcgaccgcgaagcgatgatccgccgcttggaggccgaaatgaag
gaagcggccaaaaaccttcagttcgagcgggccgcggagctgcgtgacgcaatcatggaa
ctcaaggcggagtaa
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