Paenibacillus macerans: LMZ02_05470
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Entry
LMZ02_05470 CDS
T09394
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmae03032
]
LMZ02_05470 (gyrB)
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_05470 (gyrB)
Enzymes [BR:
pmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LMZ02_05470 (gyrB)
DNA replication proteins [BR:
pmae03032
]
Prokaryotic type
DNA Topoisomerases
LMZ02_05470 (gyrB)
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LMZ02_05470 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UMV48839
LinkDB
All DBs
Position
1191026..1192930
Genome browser
AA seq
634 aa
AA seq
DB search
MNEQTYDESNIQVLEGLEAVRKRPGMYIGSTSVRGLHHLVWEVVDNSIDEALAGYANKID
VIVHEDNSVTVIDNGRGIPVGLNEKLQKSTLEVVMTVLHAGGKFGGGGYKVSGGLHGVGV
SVVNALSTKVVVEVRRDGHAYQQEYHRGVPQYDVRVIGDTEETGTKTRFYPDPEIFTETT
VFDYNTLLTRIRELAFLNKGINLSLTDERTGASDSFHYEGGIKEYVIFLNHNKEVLHEEP
IYVEGQREMIQVEIALQYNEGYTENIYSFANNIHTHEGGTHESGFKSALTRIINDYARKA
GMIKDNDNNLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEF
LEENPAVSRRVLEKSLQASRAREAARKARELTRRKSALEVSALPGKLADCSSKDASISEL
YIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILGNAEIRAIITALGTGIGE
EFDIAKARYHKVIIMTDADVDGAHIRTLLLTFFFRYMRKIIEAGYVYIAMPPLFKIERNK
TVRYAQSEKERDEIIAEFGEGVKVNVQRYKGLGEMNPEQLWETTMDPESRTMQQVSIADA
IQADAIFDTLMGDNVEPRRDFIHEHARYVKNLDI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaaacgtatgacgagagtaacatacaggtgctcgaaggcctggaagcggtc
cggaaacggccggggatgtatatcggatccaccagcgtccgcggtttgcaccacttggta
tgggaagtcgtagacaatagtatagacgaggcgcttgccggctatgccaacaaaatcgac
gtcatcgttcatgaagataacagtgtgactgtcatagacaacggccggggcattccggtc
ggcctgaatgagaagctgcagaaatcaacgctcgaagtcgtcatgaccgtgctgcatgcc
ggggggaaattcggcggcggcgggtacaaagtgtcagggggacttcacggggtcggcgtt
tccgtcgtcaacgcgctgtccacgaaagtcgtcgttgaggtaagacgcgacgggcatgct
tatcagcaagagtatcaccgcggcgtgcctcaatacgatgtgcgggtcattggcgacacg
gaggaaaccgggacgaagacgagattttaccccgatccggaaatttttacggaaacgacc
gttttcgattacaacacgctgctgacgcggattcgggagctggcctttttgaataaaggc
atcaatctttccctgaccgatgaacgcaccggagccagcgattcgttccattacgaaggc
ggcatcaaggaatatgtgattttcctgaatcataacaaagaagtgctgcatgaagagccg
atttatgtggaaggccaacgcgaaatgattcaggtggaaattgccctgcaatacaacgaa
gggtataccgaaaatatttattcgtttgccaacaacattcatacgcacgagggcggcacc
cacgaatccggctttaagagcgcgctgacgcgcatcatcaacgattatgcccgcaaggcc
gggatgatcaaggacaatgacaacaatttgaccggggacgacgtgcgcgaaggattgacg
gcgattatttccgtgaaaattcccgaaccccaattcgaagggcaaacgaaaacgaagctc
ggcaacagcgaagtgcggggaatcgtggaatcgctgtttgcggagaagctgcaggaattt
ttggaggaaaacccggccgtatcccggcgcgtcctggagaaatcgctgcaggcttcgcgg
gcgcgggaagcggcccgtaaagcgcgcgagctgacgcgccgcaagagcgccctggaggtc
agcgccctgccgggcaagctggcggattgctcctccaaggacgcctcgatcagcgaactg
tacatcgtcgaaggcgactcggccggcggctcggcgaagcaagggcgggaccgccacttc
caggcgattttgccgctgcgcggtaaaattttgaacgtggagaaagcgcgtctggaccgc
atcctcggcaacgccgaaatccgcgcgatcatcacggcgctgggcaccgggatcggcgag
gagttcgatattgcgaaggcgcggtatcacaaggtcatcatcatgaccgacgccgacgtt
gacggcgcccatatccggacgctgctgctgacgtttttcttccgctacatgcggaagatc
atcgaagccggttacgtttatatcgcgatgccgccgctgttcaaaatcgaacgcaacaaa
acggtgcgctacgcccagtccgagaaagaacgcgatgaaatcatcgccgaattcggcgaa
ggggtaaaagtcaacgttcagcgctacaaaggtttgggcgagatgaacccggagcagctg
tgggagacgacgatggatccggaaagccggacgatgcagcaggtatcgattgccgacgcc
attcaggcggatgcgatttttgatacgctgatgggcgacaacgtcgagccgcgccgcgat
ttcattcacgagcatgccagatacgtcaagaacctcgatatctaa
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