Paenibacillus macerans: LMZ02_06155
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Entry
LMZ02_06155 CDS
T09394
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pmae
Paenibacillus macerans
Pathway
pmae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMZ02_06155 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmae03021
]
LMZ02_06155 (rho)
03019 Messenger RNA biogenesis [BR:
pmae03019
]
LMZ02_06155 (rho)
Transcription machinery [BR:
pmae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LMZ02_06155 (rho)
Messenger RNA biogenesis [BR:
pmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMZ02_06155 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA
OB_RNB
AAA_22
S1CSD-TOTE-2
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
UMV48961
LinkDB
All DBs
Position
1350991..1352325
Genome browser
AA seq
444 aa
AA seq
DB search
MDLQIADLEGMKLTELYKLAKQYQIPYYGQLKKKELIFAILRAQAEQSGLMFMEGVLEIL
PEGYGFLRPINYLPSTEDIYISASQIRKFDLRTGDLVSGKCRAPKENERYFGLLQVNAVN
GEDPAAASERLHFPALTPLYPQKKLVLETSPTHLSTRIMDLLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPDIELFVLLIDERPEEVTDMQRSVKGEVIASTFDELPENHIKVA
ELVLQRALRLVEHKKDVVILLDSITRLARAYNLVVPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALVDTGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRS
GTRREEVLLTKEELDTIWSIRKNMNDSYDFVEGFLKKLRDSKTNAEFLASFDTAGGSPSA
SGNGGARRPVRTGSASSSPRMGSS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcaaatcgccgatttggaagggatgaaactgaccgagctgtacaagcttgcg
aagcagtatcagattccttattacggccagttgaaaaagaaagaattgattttcgcaatt
ttaagggcgcaggcagaacagagcgggctgatgtttatggaaggcgtgctcgagattttg
ccggaagggtacggtttcctaaggccgatcaattatttgcccagcacggaagacatttat
atttccgcttcccaaatccgcaagttcgatctgcgtacgggggacctcgtctccgggaag
tgccgggctccgaaagaaaatgaacggtatttcggactccttcaagtcaacgccgtcaac
ggagaggatcccgccgctgcctccgaacggctgcatttcccggcgcttactccgctttat
ccgcagaagaagctcgtgctggaaacttccccaacccacttatccacccgcatcatggat
ttacttgccccggtcggactcggacaacgcggtttgatcgtggcgccgccaaaagcaggg
aagacgctgctgctcaaagaaatcgccaacagcatttccaccaacaatcccgatatcgag
ttattcgtattgctgatcgacgaacgtccggaagaagtgacggatatgcagcgttcggta
aaaggcgaagtcatcgcttcgacgttcgacgagcttccggagaatcatatcaaggtggcg
gagctggtactgcagcgcgcattgcggctggtggagcacaagaaggacgtcgtgattctg
ctggacagcatcacgcggctcgcccgggcgtacaatctggtcgttccgccgtccggccgc
acgcttagcggggggattgatcctgcggctttccatcgtccgaagcggtttttcggctcg
gcccggaatgtggaggagggcggcagtctgacgattttggcgaccgcgctggtcgatacg
gggtcgcgtatggacgatatcatttacgaggaatttaaaggcaccggcaacatggagctg
catttggaccgcaagctggcggagcgccgtatttttccggccatcgacatccgccgttcg
ggaacgcgccgcgaggaagtactgttgaccaaggaagagctcgatacgatctggtcgatc
cgcaaaaacatgaacgattcctacgactttgtggaaggattcctcaagaagctgcgggat
tcgaagacaaacgcggaatttctggcttccttcgatacggcgggcggctcgccatccgca
agcggaaacgggggagcacgccgtccggtacggaccggttccgcttcatcttcgccgcgg
atgggttcgtcgtag
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