Paenibacillus macerans: LMZ02_06860
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Entry
LMZ02_06860 CDS
T09394
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae00040
Pentose and glucuronate interconversions
pmae01100
Metabolic pathways
pmae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LMZ02_06860
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMZ02_06860
Enzymes [BR:
pmae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LMZ02_06860
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Trypan_PARP
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UMV49078
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Position
1492752..1494968
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AA seq
738 aa
AA seq
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MKNRVAKAWSMVLFFSLAISLITGGLQNTTTYAAGLSIIGGGGWNETAYVEWSPVSNAEG
YNVYVKPESAADSSYQQIDNELIRKYPSYWRADALGLAAGDYVMKVEARLTDGSTVSAVS
DKLSVASHDRSGFAFSSDSLYGTGSGAYNDDGTLKDGAQVLYVTSETAQTVTLDVKINSS
GRVQTGVGIGEILQLRQKGYDTTPLAIRFIGKVTADDMKGQLNSSGYLQVKGKKNYSEMN
MTVEGIGDDAYAYGWGILLRYTGNVEVRNLGLMLFPDDGISLDTGNANVWVHNNDLFYGT
AGGDADQAKGDGSTDLKKGSTNITISYNHYWDSGKAALVGLSESAEFFATFHHNWFDHSD
SRHPRIRVASVHIYNNFYDGVSKYGVGVTTGASAFVESNYFRHTKYPMMSSLQGTDALGE
GTFSGETGGVIKAYNNMIVDAASLIYANSNNGTAAANEKSFDAYLASSRNETVPSTYKAL
KGGTAYNNFDTSVDTGVNAADIDNASDVEQMVTAKAGRLNNGDFAWKFDNSVDDKSYAIN
STLMAKIRSYTTQLVSVGGNSIPQEPTPGPAPEPTPEPMPTPEPTPEPTPTPEPIPTPEP
TPEPAPEPAPTPEPAPGPTPTPIPEPTTGEQVHNFTVAGTASDFFDIEGNLSASKGTVEY
NGLTLTQCLKIETATRIGFSTTEDSTLTLVFNSTDGKKIKIDGTSYPISDGIVSVPLTPG
AHTITKDNPVNLYYMELK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagggttgcaaaagcatggagtatggttttatttttttctctggcaatttct
ttaataacaggagggctgcaaaatactacaacttatgctgccggtctttcgatcatcggc
ggtggaggctggaatgaaacggcgtatgtagaatggtctcctgttagcaatgcggaagga
tataatgtatacgttaaacctgaaagtgcagcggattcttcctatcaacaaattgataat
gaactgatccgaaaatacccttcttattggagagcggatgccttaggtcttgcagccgga
gattatgtcatgaaagttgaagctagactaacagacggttcaacggtgagtgctgtttca
gataagctgtccgtagcgtcgcatgacagatccgggtttgctttctcatcagactcgcta
tatggcacaggctcaggtgcttataatgatgatggaacacttaaggatggtgcccaggtt
ttgtatgtcacatccgagactgcacaaactgtgacccttgatgtgaaaatcaatagctcg
gggcgcgttcaaacaggtgttggtataggcgagattttgcaattaagacaaaaaggttat
gatactacgcctcttgccatccggtttattggaaaagttacggctgatgacatgaaaggc
caacttaatagcagcggctatctgcaagtcaaaggcaaaaaaaattattcggaaatgaat
atgacggttgaagggatcggagacgatgcctatgcttacggatggggaatcctgcttaga
tataccggaaatgtggaagtgagaaacctgggtctaatgttgttccctgacgacggtatt
tcgttggatacggggaatgccaatgtttgggtgcataacaatgatctattctatggaacc
gcaggaggagatgctgaccaagccaagggcgatggctccacagacctaaaaaaaggatcg
acaaatattacgatctcttataatcactactgggattcaggaaaagcggctctggtcggc
ttgagtgaatcggctgaattttttgccaccttccatcataactggtttgatcattcggac
tcccgtcatccgcggatcagagtggcatccgttcatatctataataacttctatgatgga
gtctcgaaatatggcgtcggtgttacgacgggagcttcagcctttgtggaatccaattat
tttagacatactaaatatccaatgatgagttccttgcaaggtacggatgctttaggggaa
ggtacgttttcaggcgaaaccggaggtgtgatcaaggcctacaacaatatgattgttgat
gcggccagtctgatttatgcaaactccaacaacgggacagctgcggcaaatgaaaaatca
tttgatgcgtatttagcttcgtcgagaaatgaaaccgtaccaagcacatacaaagcatta
aaaggaggaacggcttataataactttgatacaagcgtcgatacgggcgtaaatgctgca
gacattgataacgcaagcgatgttgaacaaatggttactgccaaagcgggacgcctgaat
aacggtgactttgcatggaaatttgataattccgtggatgacaagtcgtatgcaatcaat
tcaactctaatggctaaaataagaagctacacaactcaacttgtatcggtgggcggaaat
tcaatcccgcaagaaccaacaccaggacccgcaccagagccaacgccggagcccatgcca
acacccgagcctacgccagaacctacacctacgccagaacctatacctacaccagaacct
acaccagaacccgcgccggaacctgcaccaacgccagagcctgcacccgggccaacaccg
actcccattccggaaccaacaaccggagaacaagttcataactttaccgtagctggaacc
gccagcgacttctttgatattgaagggaatctttcggcaagcaagggaactgtggagtat
aacggtctgactctaacgcaatgtttaaaaatcgagaccgcgacccgtatcggtttctcc
acaacggaagattcaacattaacgctagtgtttaattcaacagacggaaaaaagatcaag
atcgatggaaccagttatccaatcagtgatggtattgtcagcgtaccgcttactcctggc
gcacataccattacaaaagataatcctgtaaatctttattatatggaactgaaatag
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