Paenibacillus macerans: LMZ02_11555
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Entry
LMZ02_11555 CDS
T09394
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_11555
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMZ02_11555
Archaeal homologous recombinant proteins
LMZ02_11555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UMV49944
LinkDB
All DBs
Position
2627656..2628852
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AA seq
398 aa
AA seq
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MKIFHTADWHLGKLVQGVYMTEDQRHVLQQFVNEIEAERPDAVIIAGDLYDRAVPPTEAV
QLLDDVLESIVLRLKVPVLAVAGNHDSPTRLDFGHRIMRASGLHIAGVLSSPLEPVVLRD
EHGEVHFHLVPYTEPGKVRQTFGEQEVRTHDDAMRVITDAIKRTMDPGARHVLVGHAFVT
PHGEPEANTSDSERPLAIGGAEHVSARHFAGFHYTALGHLHQAHHVANETVRYAGSPLKY
SISEEHHRKGYLVVELDGAGLARVERRPLVPRRDMRTVEGLIADIERHPVNEDYVFVRLL
DEALVLSPMERVRSVYPNAMHVERKQAIRGLTGDLQETQGRAQMDGYSLFRAFYQEVTGD
EPSAETERLFAETLQEIVLKEGERDEAIEADDDGVRAV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttttcacacggcggactggcatctggggaagctggtgcagggcgtatatatg
acggaggatcagcggcacgtattgcagcagtttgtaaatgagattgaagcggagcggccg
gatgcggtaatcattgcgggcgacttgtacgaccgggcggttccgccgacggaggccgtg
caattgctggacgatgtgctggagagcatcgtgctgcggcttaaggtgccggtgctggca
gtggccgggaatcacgacagcccgacgcggctggatttcggccatcgcatcatgagggcg
tcgggattacatattgcgggggtgctgtcctccccgcttgaaccggtggtgctacgcgac
gagcatggggaggttcatttccatctcgtcccttataccgaacccggcaaagtgcggcag
acgttcggcgagcaggaggtccgcacccatgatgacgcgatgcgggtcattacggacgcg
atcaaacggacgatggatccgggcgcgagacatgtgttggtcggacatgccttcgtgacg
ccgcacggggagccggaagcgaacaccagcgattcggagcggccgctggcgatcggtgga
gccgagcatgtgagcgcccggcattttgccggatttcattatacggcgctggggcatttg
catcaggcgcatcatgtcgctaatgaaacggtccgttatgccggttcgccgctaaaatat
tcgatttccgaggagcatcaccggaaaggatatttggtcgtcgagctggacggcgcgggg
ctggcgcgggtggagcggcggccgcttgtcccaaggcgcgatatgcgcacggtggaaggg
ctgatcgccgatatcgagcgccatcccgtcaacgaagattacgtgtttgtgcgcctgctg
gacgaggcgctggtgctgtccccgatggaacgggtgcgctcggtgtatccgaacgccatg
catgtggagcggaaacaggcgatccgcggcctgacgggagatctgcaggaaacccagggc
cgcgcgcaaatggacgggtattctttgttcagggctttttatcaggaagttacgggcgac
gagccgtccgcggaaacggaacggctgtttgccgagacgctgcaggaaatcgtcttgaag
gaaggggaacgggatgaagccattgaagctgacgatgacggcgttcgggccgtataa
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