Paenibacillus macerans: LMZ02_11560
Help
Entry
LMZ02_11560 CDS
T09394
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_11560
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMZ02_11560
Archaeal homologous recombinant proteins
LMZ02_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
PIF1
AAA_21
Pecanex_C
Motif
Other DBs
NCBI-ProteinID:
UMV49945
LinkDB
All DBs
Position
2628809..2631901
Genome browser
AA seq
1030 aa
AA seq
DB search
MKPLKLTMTAFGPYKDTEVIDFSELEEHRLFVVSGNTGAGKTSIFDAICFALYGSASGED
RNDSKMLRSHFADDQVYTSVDFEFELKGHVYRVFRQLAHVKAGNKVATGDRYELYELANG
EEIPLTDRQIVSQIDQKIRELIGLTKEQFIQIVMLPQGEFRKLLTSETENKEEILRRIFK
TGLYKHVADHLNEKRKEMQQICHSLQKTRDLYIEQAKSALGGREGSALHTVFRQEYYNTH
QVLEALDQEIAYFAGQTNEKKQQLEREAAEHQRQTALYHQAKSVNEQFDLLEQKAAAWQQ
LAEQEPEYREKAARLKRAEQAVHLQVYERHDAEAADDLARKEKLLEAAQAQNETAKRLLE
TAAARYAEEEGRKEDREQALRELDRLQGFLPTVKELDAKRQLVAALAAAAEKLSKQAEQV
QRELELLRTERSAKGGRVKEIEERVALLPDKSARLAVLRQQAQIVQEYLKLSEKAKKERE
TEQGAKAAYEHANELYTALEERWMEGQAGLLAALLQDGEACPVCGSVHHPQKAAASGDAP
DKAALDRLRRDKADAEKAYLQAQAELAATRRQMDERLQEVREHGFDPADIRHVYDELVKE
GKALAAEEKALKEQHAGLLELRKELEALEQRLEELRLRKERADHASQEQKTSYAREKALF
DRELAALPEDARSLNQLEERIRQAEQRKTLLEAAWHEAQQRYQEANGQSIKAGENLSHAE
SQLADARAQREKARQSYAQALTQAGFAAEEEYKAVKMADAERQALKEQIEAYNAAVAANR
AQLEEMRAQLADKKRQDLASMELRLQELERQVETLRKECLLAETQCKKAEESKQDIVRAE
QTWQEAEREHGLVKGLYDVVRGENSKKISFERYLQIEFLVKIIHHANERLARMSGGQFYL
VRSERMEKRGKQSGLGLDVYDNYTGQLRDVKTLSGGEKFNASLCLALGLADVIQAYEGGI
SLETMFIDEGFGSLDEESLNKAIETLIDLQQSGRIIGVISHVQELKQAIPAILEVKKTKE
GHSHTRFVLT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattgaagctgacgatgacggcgttcgggccgtataaagatacggaagtcatc
gatttctccgagctggaggaacatcgcctgtttgtggtttccgggaataccggagcgggt
aaaacctcgattttcgacgcgatctgttttgccttgtacggcagcgccagcggcgaagac
cggaatgacagcaagatgctgcgcagccacttcgcggacgatcaggtatacacctcggtg
gacttcgaattcgagctaaaagggcacgtataccgggtgttccggcagcttgcccacgtt
aaagcgggcaacaaggtggcgacgggcgaccggtacgagctgtatgaattggcgaatgga
gaagagatccctctgaccgaccgtcagatcgtttcgcaaatcgaccaaaaaatccgcgag
ctcatcggcttgaccaaagagcagttcatccagatcgttatgctgccgcagggcgaattc
cgcaagctgctgacgtcggagacggagaataaagaggagattttgcggcggattttcaag
accggactgtacaagcacgtcgccgaccacctcaacgaaaagcgcaaggaaatgcagcaa
atttgccacagtctgcaaaagacgcgggatttgtacatagagcaggccaaaagcgctttg
ggcgggcgcgaaggctccgcgctgcacaccgtttttcggcaggaatattacaatacccat
caggtgctcgaggcgctggatcaggagatcgcctatttcgccggacagaccaacgagaaa
aagcaacagctcgagcgggaagcggccgagcatcagcggcaaacggcgttatatcatcag
gccaaaagcgtcaacgagcagtttgatctcctcgagcagaaagctgcagcctggcagcag
ctggccgagcaggagccggaataccgggaaaaagcggcgcgccttaagcgggcggagcag
gccgtgcatttgcaggtgtatgaacggcatgatgcggaagcggcggacgatttggcgcga
aaagaaaagctgctggaagcggcccaggcccaaaacgagacggccaagcggctgttggag
acggcagcggcccggtatgccgaggaagaaggcaggaaggaagatagggagcaggctttg
cgcgagcttgaccggctgcagggctttctgccgacggtcaaagagcttgacgccaagcgg
cagcttgtcgccgcgctcgccgcggcagccgagaagctgtccaagcaggcggagcaagtt
cagcgcgagttagagctgctaaggacggagcggtccgccaaggggggccgggtcaaagaa
atcgaagagcgggtggccttgttgccggataaatccgcgagattggccgttcttaggcag
caggcccagatcgtgcaggagtatttgaagctgtccgaaaaagcgaaaaaagagcgggaa
accgagcagggggcgaaggcggcttacgaacatgccaacgagctgtatacggcgctggag
gagcgttggatggaagggcaggcgggtttactcgccgctcttctgcaggacggcgaagcc
tgcccggtgtgcggcagcgttcatcatccccagaaggcggcggcttcgggagatgcgccg
gacaaagcagcgctcgaccggctgcgccgcgacaaagcggatgccgaaaaagcctacctg
caagcgcaggcggaactcgccgcaacgcggcggcaaatggacgagcggctgcaggaggtg
cgggagcatggatttgatcccgccgacatccgccatgtttatgacgaactggtgaaggaa
gggaaagcgctggccgccgaggaaaaagcgctcaaggaacagcacgccgggctgttggag
ctgcgcaaggaactggaagctctggagcagcggttggaggagctgcggttgcgaaaagag
cgggccgaccatgccagccaggagcagaagacaagttatgcgcgggagaaggcgctgttc
gatcgggagctggcggccttgcccgaggatgctcgcagcttgaatcagctggaagagcgg
attcggcaggcggagcagcggaagactttactggaggcggcttggcatgaagcgcagcag
cgctaccaggaagcgaacgggcagagcatcaaagccggggaaaacctgagccatgcggag
agccagcttgcggacgcccgggctcagcgggagaaggcccggcaaagttatgcccaagct
ttaacccaggccggcttcgccgcggaggaagagtataaagccgtgaaaatggcggatgcc
gaacgccaggcgctgaaggagcaaatcgaagcctacaacgccgccgtggccgccaaccgg
gcccagcttgaggaaatgagggcgcaattggccgacaagaagcggcaggacctggcctcc
atggaactgcggctgcaagagctggagcggcaagtggagacgttgcggaaggagtgtctg
ctggccgaaacccaatgcaaaaaagcggaggaaagcaagcaggacattgtgcgcgcggag
caaacgtggcaggaagccgaacgggagcatgggctggtcaaaggactgtatgacgtcgtg
cgcggggaaaacagcaaaaaaatctcgttcgagcgttatttgcaaattgaatttttggtc
aaaatcatccaccatgccaacgagcggctggcccggatgtccggcggccaattttacctc
gtccgcagcgaacggatggagaaacgcgggaaacaaagcggcctcggactcgacgtgtac
gacaattatacgggccagcttcgcgacgtcaagacgttgtccggcggggaaaaattcaac
gcctcgctgtgcctcgcgctcggcttggccgacgtgattcaggcctacgaaggcgggatt
tcgctggaaacgatgttcatcgatgaaggcttcggctcgttggacgaagaatcgctcaac
aaggcgatcgaaacgctgatcgacctgcagcaatccgggcgcatcatcggcgtcatctcg
catgtgcaggaactgaagcaggcgatcccggccattctcgaggtcaagaaaacgaaagaa
ggccacagccacacgcgttttgtgctgacctga
DBGET
integrated database retrieval system
