Paenibacillus macerans: LMZ02_15750
Help
Entry
LMZ02_15750 CDS
T09394
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMZ02_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmae03019
]
LMZ02_15750
03009 Ribosome biogenesis [BR:
pmae03009
]
LMZ02_15750
Enzymes [BR:
pmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMZ02_15750
Messenger RNA biogenesis [BR:
pmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMZ02_15750
Ribosome biogenesis [BR:
pmae03009
]
Prokaryotic type
rRNA helicases
LMZ02_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UMV45002
LinkDB
All DBs
Position
3568463..3570025
Genome browser
AA seq
520 aa
AA seq
DB search
MSTFAEFGLEPKVLQAITELGFEEATPIQSKSIPIALTGRDLIGQAQTGTGKTAAFGLPL
IHKIPKEEDRIVALVMTPTRELAIQVAEEIGKLSRFKGIRSLPIYGGQDIVRQIRALKKR
PQIIIGTPGRLLDHINRKTIKLDDVQTVVLDEADEMLDMGFMDDIQSILKLVPEERQTML
FSATMPANIQKLAQQFLKNPEHVSVIPKQVSAPLIDQAYIEVHERQKFDALTRLLDMESP
ELAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGAAYSFVTPREIDHLHFIERITR
HKITRKPLPSIAEAIEGKQRITAERLLELVEAGELNEYKGIAIQLLEQYDSVNLLAAAFK
LITGDKTENSAIELTPEEPIRVKRRNPDIRSSGRKPSGYGSRGGGYRRDNREGGSRGGYG
SKGGYSRDGGRDSYRSSDRKPRSGGDRRPSKYSENKSFDN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacatttgcagaattcggcctagagcctaaagtattacaagccatcacggaactc
ggttttgaggaagcgacgccgatccagtccaaatcgatcccgatcgccttgaccggacgc
gatttaatcggacaagcccaaacggggacggggaaaacggcggcgtttggccttccgctg
atccataaaatcccgaaggaagaagaccgcatcgtagccctggtcatgacgccgacccgt
gaactcgccattcaggtcgccgaggaaatcggcaagctttcccgcttcaaaggcatacgc
tcccttccgatctacggcggacaagatatcgtacgccaaattcgcgctttgaagaagaga
ccccaaatcattatcggcacgccgggccgtttgcttgaccacattaaccggaaaacgatc
aaactcgacgatgtacagaccgtcgttctcgatgaagcggatgaaatgctggatatgggc
tttatggacgacattcagtcgatcctgaagcttgtgccggaagaacggcagacgatgtta
ttctcggccacgatgccggcgaatatccaaaagctggcgcagcagttcctgaaaaatccg
gagcatgtctccgtcattcctaagcaggttagcgcgccgctgatcgatcaagcctacatc
gaagtgcacgagcgccagaaattcgacgctttgacccgcttgctggatatggaatcgccg
gaactggcgatcgtgttcggccggaccaaacgccgggttgacgagctgtcggaagctttg
caaaaacgcggttattccgccgacgggctgcacggcgacttgtcgcagaaccagcgcgac
aacgtgatgcgcaagttccgcgacggcagcatcgatgtgctggtggctacggacgtagcg
gcacgggggctggacgtatccggcgtaacccatgtcgtcaacttcgacctgccgcaggat
ccggaaagctatgtgcaccggatcggccggaccgggcgcgcgggcaaagaaggggccgcc
tactcgtttgtgacgccgcgggaaatcgaccatctgcattttatcgagcgcatcacgcgc
cataaaatcacccgcaagcctctgccgagcatcgccgaagcgatcgagggcaagcagcgg
atcaccgcggagcgtctgctggagctcgttgaagcgggcgaactgaacgaatataaaggc
atcgccattcagctgctggagcaatacgattcggtgaacctgctggcagccgcattcaag
ctgattaccggggataaaacggaaaattcggcgattgaattaacgccggaagaaccgatc
cgggtaaaacgccgcaatccggacatccggtccagcgggcgcaagccttcgggatacggc
agccgcggcggagggtatcgccgggacaaccgcgagggcggcagccgcggcggttatggt
tccaaaggaggctacagccgggacggcgggcgcgactcctaccgttcctccgaccgcaaa
cctcgctccggcggcgaccgcagaccttccaaatacagcgaaaacaaatcttttgacaat
tga
DBGET
integrated database retrieval system
