Paenibacillus macerans: LMZ02_20270
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Entry
LMZ02_20270 CDS
T09394
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMZ02_20270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_20270
Enzymes [BR:
pmae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LMZ02_20270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMZ02_20270
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMZ02_20270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UMV45830
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All DBs
Position
4633943..4634761
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEMENYRIQLSQHILDVPMTEITIHREKSINMEAAAFAGELTGRQIIFIERRGKHL
LFHLDNGKRLLLHLMLGGLLYLGSQEDRPDRNTQIEIAFADGQALYFIGLRLGHLHLHSA
KEAEELMAHLGPELLDRRMNEARFISILRKRRGSLKTTLVNQDVVAGIGNRYADEIAFAA
GLLPMAKLQNMSDEDLSHLYKTTREVLLEAIEAGGYIELPLFKNDTLTGGANGICRVYDR
EGEPCPRCGDSIVKAEMNGRKVFYSPGCQHDR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaaatggaaaattatcgaattcagttgtcacagcacattttggat
gttccgatgacggaaatcacgattcaccgggagaagtcgattaatatggaggctgccgcg
tttgccggggagctcaccggcagacaaatcatttttatcgagcggcggggcaagcatttg
ctgtttcacttggacaacggcaaacgcctgctgctgcatttgatgttaggcggactgctt
tacttgggctcgcaagaggaccggccggaccggaacacgcaaatcgaaattgcgtttgcc
gatggccaggcgctttatttcatcggcctgcgccttgggcatctgcatctgcacagcgcc
aaggaagcagaggagctcatggcgcatttgggcccggagctgcttgaccgcagaatgaac
gaagcgcggttcatctcgattttgcgcaaacgccgcggcagcttgaaaacgacgctcgtc
aaccaggacgtcgtcgccggcatcggcaaccgctatgcggatgaaattgcatttgccgcc
ggactgctgccgatggccaagctgcaaaacatgagcgacgaagatttgtcgcatctctat
aaaacgacgagagaagtgctcctggaagcgatcgaagcgggcggatatatcgaactgccg
ctgttcaagaacgatacgcttaccggcggagcaaacgggatttgccgcgtgtacgaccgg
gagggagagccctgtccgcgctgcggcgattccatcgtgaaagcggaaatgaacggacga
aaagtgttttacagtccgggctgccaacatgaccgctga
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