Paenibacillus macerans: LMZ02_23270
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Entry
LMZ02_23270 CDS
T09394
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMZ02_23270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmae03019
]
LMZ02_23270 (pnp)
03016 Transfer RNA biogenesis [BR:
pmae03016
]
LMZ02_23270 (pnp)
Enzymes [BR:
pmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LMZ02_23270 (pnp)
Messenger RNA biogenesis [BR:
pmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMZ02_23270 (pnp)
Transfer RNA biogenesis [BR:
pmae03016
]
Prokaryotic type
tRNA degradation factors
LMZ02_23270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UMV46376
LinkDB
All DBs
Position
complement(5302516..5304621)
Genome browser
AA seq
701 aa
AA seq
DB search
MENHVKMDLGGRPLILETGRLAKQANAAVMVRYGDTAVLCTVTASSEPKDLDFFPLTVNY
EEKLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQIVNLVMSVDQD
CEPEIAAMIGTSAALSISDVPFNGPIGGVAVGRVNGEFVINPNIAQQEASDIYVVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHEEIKKIVAVIEELVQVAGKEKMQVKLHAVDENVN
QEVRAYAKDRLVEAVKIAEKHARQDAIDAINEETVAYFEEKYIESPELIADVKEVLHDIV
KEEVRRLITHEKIRPDGRKLSEIRPIECDISLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGIDLEESKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPPESEF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIDGIDRQILTDALKQAREGRMFILAKMMERI
QKPKEHLSPYAPKILIMNINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASAN
EEMNNKARSIIEGIVKEVVVGEIYVGTVKRIEKFGAFVEILPGKDGLVHISQLSTERVGK
VEDVVAIGDTVTVKVTEIDSQGRINLSRKAVLTAQTEKAPS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcatgtgaaaatggatctggggggaagacctcttatcctcgaaacgggccga
ttggccaagcaagccaacgcagcggtcatggtgcgttatggggatacggctgtgctgtgc
acggtaacggcctcctcggaaccgaaggacctggacttttttccgcttacggtcaattat
gaagaaaagctgtatgcggtcggtaaaattcccggcggcttcattaaacgcgagggccgt
cccagcgaaaaggccattttggccagccggttgacggaccgtccgattcgtccgctgttc
ccggaagggttccgcaatgatgtgcaaatcgtcaatctggtcatgagcgtggatcaggac
tgcgagcctgaaatcgccgcgatgatcggaacgtcggccgcgctgagcatttcggatgtt
ccgtttaacgggccgatcggcggcgtggcggtgggacgggtgaacggcgaatttgtgatc
aacccgaatatagcccagcaggaagccagcgatatttacgtcgtggtggcagggacgaaa
gacgcgattatgatggttgaggcggaagcgaacgaagttccggaagaagttatgctggaa
gccatcatgttcggccatgaggaaatcaaaaaaatcgttgccgtaatcgaagagcttgtc
caagttgccggcaaagagaaaatgcaggtgaagctgcacgcggtcgacgaaaacgtgaac
caggaagttcgcgcctatgccaaggatcggctcgtggaagccgtaaagatcgccgagaag
catgcgcggcaggatgcgattgacgccatcaacgaggagacggttgcttatttcgaagag
aaatacatagagtctccggagctcattgccgacgtcaaggaagtgctgcacgatatcgtt
aaagaagaagtccgccgcttgatcacgcatgagaaaattcgtccggacggccgtaagctc
agcgaaatccggccgatcgaatgcgatatcagcctgttgccgcgtacccacggttccggt
ttgtttacgcgcggccagacgcaagctctaagcgtttgtacgctcggcgcgctgggcgat
gtgcaaattctcgacggcatcgacctggaagagtcgaaacggttcatgcatcattacaac
ttccctccgttcagcgtaggcgaagcccgtccgctgcgggcaccgggccgccgcgaaatc
ggtcacggcgcgcttggcgaacgggcgctttccaaggtcattccgccggaatcggaattc
ccttacacgatccgcctcgtgtcggaagtattggaatcgaacggttcgacgtcgcaagcc
agcatttgcgccagcactttggcgatgatggacgcgggcgtgccgatcaaagcgccggta
gccggggtggcgatgggcctgatcaaagacggagagcatgtctccattttgacggacatt
caagggatggaggatcatctcggagatatggactttaaagtggccggaaccgcggagggc
gtaaccgccattcaaatggacatcaagatcgacggcatcgaccggcagattttgacggac
gctttgaagcaggcgagagaaggccggatgtttattttggccaagatgatggagcgcatc
caaaagccgaaggagcacttgtctccgtatgcgcctaagatcctcatcatgaacatcaat
ccggacaaaatccgcgatgttatcggggccggcggcaagatcatcaacaagatcatcgag
gaaaccggcgtgaaaatcgatatcgaacaggacggccgcgtctttatcgcttcggccaac
gaagagatgaacaacaaagcccgttcgattatcgaaggcatcgtgaaggaagtggttgtc
ggcgaaatatatgtcggcaccgtaaaacggatcgaaaaattcggcgcttttgtggaaatt
ttgccgggcaaagacgggctggtgcatatctcccagctttcgacggagcgtgtaggcaaa
gtggaagacgtcgtcgccatcggcgatacggtaaccgtcaaggtgaccgaaatcgacagc
caaggacggatcaatctttcccgcaaagcggttttgactgcccaaacggaaaaagctcct
tcataa
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