Paenibacillus macerans: LMZ02_23285
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Entry
LMZ02_23285 CDS
T09394
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmae03016
]
LMZ02_23285 (truB)
Enzymes [BR:
pmae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMZ02_23285 (truB)
Transfer RNA biogenesis [BR:
pmae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMZ02_23285 (truB)
Prokaryotic type
LMZ02_23285 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
YicC-like_C
Motif
Other DBs
NCBI-ProteinID:
UMV46379
LinkDB
All DBs
Position
complement(5306300..5307217)
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AA seq
305 aa
AA seq
DB search
MTTYEGILPVLKPAGFTSHDVVAKCRGILKMKRIGHTGTLDPAVTGVLPLCLGRATRMVE
YLQELPKEYEATLILGVATDTEDMSGTVVERLDQVSVTEEAVRQVLQRFVGTISQVPPMY
SALKHDGKRLYELAREGKTVERKAREVTIYGLELLSFQPEGPHPKIKFRALCSKGTYIRT
LCVDIGRALGVPAAMGQLKRTVSAGIAEESCLTLEEIARHAAQGDLASYLLPVDQGVRHL
PAHTIAGDKVKAALQGQRLPAAAVHPRANRGELIRLYDPQQRFLGIFQADEEMPAVKAVK
VFLPD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtatgaaggcatcctgccggttttgaaacccgccggttttacctcccacgac
gttgtggccaaatgccgcggcatcctcaaaatgaagcggatcggccatacgggcacgctc
gatccggctgtcaccggagtgcttccgctttgcttgggacgggctacccggatggtcgaa
tatttgcaggagctgcccaaggaatatgaggccacgctgattttgggggtggccacggac
accgaagacatgtcgggtacggtcgtggagcggctggatcaagtttcggtgacggaagag
gccgtaaggcaggtgcttcagcgattcgtcggcacgatttcccaggttccgccgatgtat
tccgccttgaagcacgatggaaagcgcctctacgagctggcgagagaaggaaaaacggtc
gaacgcaaagcccgcgaggtgacgatttatgggctggagctgctgtcctttcaaccggag
ggaccgcatccgaagatcaagttccgggcgctctgctcgaaaggaacttacatccgcacg
ctttgcgtcgatatcggccgggcgcttggcgtgccggcggcgatggggcagctgaagcgg
acggtgtcggccgggatcgcggaagagagctgtttaacgctggaagaaatcgccaggcat
gctgcgcaaggggacctggcttcctatttgctgccggtcgaccagggagtccggcatctg
ccggcacatacgatcgccggggacaaagttaaggcggccctgcaaggtcagcgcctgccc
gccgccgcggtacatccgcgggcaaaccggggggaactgatccggctttatgatccgcag
cagcggtttttggggatattccaggcggatgaagaaatgcctgccgtgaaggcggtcaag
gtgttccttcccgactga
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