Paenibacillus macerans: LMZ02_25710
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Entry
LMZ02_25710 CDS
T09394
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae00300
Lysine biosynthesis
pmae00470
D-Amino acid metabolism
pmae01100
Metabolic pathways
pmae01110
Biosynthesis of secondary metabolites
pmae01120
Microbial metabolism in diverse environments
pmae01230
Biosynthesis of amino acids
Module
pmae_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMZ02_25710 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMZ02_25710 (dapF)
Enzymes [BR:
pmae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LMZ02_25710 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Secretin_N
Motif
Other DBs
NCBI-ProteinID:
UMV46833
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Position
complement(5815526..5816362)
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AA seq
278 aa
AA seq
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MEFTKMHGLGNDFLVFYGHTELPENVSELAVTWCDRYFGVGGDGLVFILPSEQADFKMRI
INSDGTEAEQCGNAIRCVSKYVYDNGLVDKENVTIETLGAGVQQVSLQVENGAVKTVRVD
MGEPILDGLAVPTTLEDSPVLNRPIEAGGREFSFTAVSMGNPHCVIYVDDAPNFDLTTWG
PKLEVHPYFPRKINVEFATVTSRDRVEMRVWERGAGPTLACGTGACATLVSSVLNGLTDR
AAWIGLKGGDLFIEWDERDNHVYMTGPAEAVYKGSIEI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacgaaaatgcatggactgggcaacgatttcctcgttttttacgggcatacg
gagctgcctgaaaatgtatccgagctggcggtaacctggtgcgaccggtatttcggggtc
ggcggggacgggctcgtgtttatccttccgtcggagcaggccgatttcaaaatgcggatc
atcaactcggacggtacggaagccgagcagtgcggcaatgcgatccgctgcgtgtccaag
tacgtatacgacaacggcttggttgataaagagaacgtgacgatcgaaacgctcggcgcg
ggggtgcagcaggtcagcctgcaggtggagaacggagccgtcaaaacggtgcgcgtcgat
atgggcgaaccgattttggacggcctggccgttccgaccacgctggaggacagcccggtg
ctgaaccggccgatcgaggcgggggggcgcgagttttccttcacggccgtgtcgatgggc
aatccgcattgcgtcatttacgtggacgacgccccgaacttcgatttgacgacgtggggg
ccgaagcttgaggtgcatccttattttccgcgtaaaatcaatgtcgagtttgcgaccgtg
acgagccgggaccgggtggaaatgcgcgtctgggaacgcggagccgggccgacgctcgcc
tgcggaacgggggcctgcgccaccttggtatcctccgtgctgaacgggctgacggaccgg
gcggcctggatcgggctgaagggcggggacctgtttatcgaatgggatgaacgggacaac
cacgtatatatgaccggcccggcggaagcggtgtacaagggcagcatagaaatctaa
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