Paenibacillus macerans: LMZ02_26625
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Entry
LMZ02_26625 CDS
T09394
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_26625 (addB)
Enzymes [BR:
pmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMZ02_26625 (addB)
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LMZ02_26625 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
nSTAND1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UMV46998
LinkDB
All DBs
Position
complement(6014061..6017663)
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AA seq
1200 aa
AA seq
DB search
MSLQFIIGRSGSGKSSLILERVLARLRENPAGPPLIILAPEQGTFQIEQSIVTAPGLKGT
VRTQVLGFRRLALRVMQETGGAALVPINDEGKKMLLYKILRRRRGELKLFGRGGDQLGLI
DRIAALYTEMKKFNVDFSHLPEHHQFLQSAAGESRLLVDKMHDLGLLFAEFDAELAKLYI
DNEDHVVKLAEGAAESAYLRGSEIWIDGFHTFTPQEYTAIGALLKAASNVTVALTLDRPY
DDGVVPHELNLFYGPAVAYTKLLRIAEEAGVKTGRTEIVDRRPIPRFRESETLSYLESAY
ERRSPWPGTTAPKDLGRALALRRAGNRRAEVEGAAREMVRLAREEDVRWREMALLVRNLD
DYDHLIAPIMEEYGIPYFMDRKKSMLHHPLIEFIRAALDVVIGYWKYEDVFRCVKSGFLL
PPGGNLTRAHMDMLENYVLASGIQGYRWYDGRPWKAAPSLSLEQGEDKGRTSAQGEAGLQ
MLEQCRVAVAKPLAAFEKRIKKAKTAAEMCTAVYQLLEDTEAARHLDLLAHMMLQEGQPQ
RAMEHRQLWGAVLDLLDQIVEMMGGEVLELELFAGVLETGLKDLKLSLVPPSLDQVLVGS
TDRTRSGAVKHLFLIGVNEGIMPAALQEEGVLSDQERLRLAEIGLELAPGVARKLLDERF
LIYGALTLPSRSLWISYAAADEDGGALLPSEVIRHVRRIFPDLREQFIGQAPPAVAEPGS
GAGQDEAQLQYVSRPGPALSALIGQLRLWKAGEAVSPVWWSVLEWYRGKPEWEERTALLL
GSLDYRNRVRGLTPATSRKLYGKRLRTSVSRMEKFSACPFAHFASHGLKLKERQLYRLKA
PDIGQLFHAALSAMAVTFKAQNRSWGSLTPEECLREADAAVDQLAPKLQGEILLSSKRYG
YISRKLKTIVGRASLILGEQARRGSFEPVGLELDFGPGRPLPPLTFELPNGCVMEIVGRI
DRVDMAEGDGGLLLRVIDYKSSQTDLRLHEVYYGLSLQMLTYLDVLLSSAEAWLGRPAIP
AGTLYFHVHNPLLQSSNGMSPEQAHQELLKRFKMKGLLLADRDVIAKMDGQLEKGYSDIL
PVAVKADGGFYSSASVAAPEQWQTLLRSVRQTITEIGTRITDGDVRIAPYRIGMETACTH
CVYKPVCRFEESLEGSSYQMLSKPGKQEIWTLLEQGRRMETGREGGQKSAHESGKEAASS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacagttcatcatcggccgttccggaagcggcaaaagcagcctgattcttgag
cgggttctcgcccggctgcgggaaaatcccgcgggtccgccgctgattattctcgctccg
gagcagggaacgttccagatcgagcagagcatcgtaaccgcgccgggtctcaagggaacc
gtacgcacccaggtgctcggtttccgccgtttggcgctgcgcgttatgcaggagacgggc
ggggcggcgctggtgccgatcaacgacgagggcaaaaaaatgctgctgtacaaaatcctg
cgccggcgccgcggcgagctgaagctgttcggccgcggcggagaccagcttggactgatc
gaccggattgccgcgctttatacggaaatgaaaaaattcaatgtggatttttcccatttg
ccggaacaccatcaatttttgcaatccgccgccggagaatcccggctgctggtggataaa
atgcatgacctcggcttgttgttcgccgaattcgacgccgagctggccaagctctatatc
gataacgaagatcatgtggtcaagctggcggaaggggcggcggaatcggcgtatttgcgc
gggtcggaaatctggatcgacggatttcatacgtttacccctcaggaatacacggcgatc
ggcgccctgcttaaggccgcgtcgaacgtcaccgtggcgctgacgcttgaccggccttac
gacgacggcgtggtgccgcatgaattaaacctgttttatgggccggcggtcgcctacacc
aagctgctccgcatagccgaagaagccggcgttaaaaccgggcggacggagattgtggac
cggcggccaatcccgcgattccgcgaaagcgaaacgctgtcttatctggaatcggcatat
gagcgccgcagtccgtggcccggcaccacagcgccaaaggatctcgggcgggcgctggcc
cttcgccgggctggcaaccgccgcgccgaagtggagggagcggcccgcgagatggtgcgg
ctggcgcgcgaggaagacgtcaggtggcgggagatggctcttttggtacggaatttggat
gattacgatcatctgatcgccccgattatggaggagtacggcatcccttattttatggac
cggaaaaagagcatgcttcaccatcccttgatcgaatttatccgcgcggcgctggatgtc
gtgatcggttactggaaatatgaagacgtgttccgctgcgtcaaaagcggttttttgctg
ccgccgggcggcaacttgacgcgcgcgcacatggacatgctggaaaattacgtgctcgcc
agcggaatccagggctaccggtggtatgacgggcggccttggaaagccgcgccaagtctg
tcgctggaacaaggcgaagataaggggcggacgtcggcccaaggggaagcggggcttcag
atgctggagcaatgccgggtggccgtagcgaagccgcttgcggcgtttgagaagcggatt
aaaaaagcgaagacggcggcggagatgtgcacggccgtctaccagctgcttgaggacacg
gaagcggctcggcatttggatctgctggcgcacatgatgctgcaagaaggccagccccag
cgggccatggagcatcggcagctttggggggcggtactggatctgctggatcagatcgtt
gaaatgatgggcggcgaagtgctggagctggagctgttcgccggggttttggaaaccggg
cttaaggatctcaagctgtcgctggtgcctccgtccctggatcaagtgctggtcggcagc
acggaccggacgcgttcgggggcggttaagcatttatttctgatcggcgttaatgaaggg
attatgccggcggcattgcaggaagaaggcgtgctcagcgaccaggagcgcctcaggctg
gcggaaatcggtcttgaactcgcgcccggggtggcccgtaagctgcttgatgagcggttt
ttgatctatggcgctttgactttgcccagcaggtcgctgtggatcagttatgcggcggcg
gacgaagatggaggggcgttgctgccctccgaagtaatccgccatgtacggcggattttc
ccggatttgcgggaacagtttattggccaggcgccgccagccgttgccgaacccgggagc
ggggccggccaggatgaagcacagctgcagtacgtgtcgcggcccgggccggcgttgtcc
gcgctgatcgggcagctgcgcctgtggaaagcgggggaagccgtatcgccggtgtggtgg
agcgtactggagtggtacagaggcaagccggagtgggaagaaagaaccgcccttttgctc
ggctcgctcgattaccgcaaccgggtgcgtggactgactccggcgaccagccgcaagttg
tacggcaaacggctgcggacaagcgtgtcgcggatggagaaattttcggcctgtcctttc
gcgcatttcgcttcccacgggctaaagctgaaggaacgccagctgtaccgcctgaaagcg
ccggatatcggccagctgttccacgccgcgctgagcgcgatggctgtcacgttcaaggcg
cagaaccggagctggggctccctgacgccggaggagtgcctgcgcgaagcggatgcggcc
gtggatcagctggcgccgaagctgcagggcgagattttgctcagctcgaagcgttatggc
tacatatcccgcaagctgaaaacgatcgtgggccgggcgtcgctgatcctgggcgagcag
gcgcggcggggcagcttcgagccggtggggctggagctcgatttcggcccgggccggccg
ctgcctccgctgacgtttgagctgccgaacggctgcgtcatggaaatcgtcggccgcatc
gaccgggtcgatatggccgagggggatggaggcctgctgctgcgggtcatcgactacaaa
tcgagccaaaccgacctaaggctgcacgaggtgtattacggtttgtcgctgcaaatgctg
acgtaccttgacgtgctgttgtcgtcggcggaggcgtggctggggcgtccggccatcccg
gcgggcaccttatacttccatgtgcataatcccctgctgcagagcagcaacggcatgagc
ccggaacaggcccatcaggaactgctcaagcgcttcaagatgaagggcttgctgctggcg
gatcgcgacgtcatcgcgaaaatggacggacaattggaaaaggggtactccgatattttg
ccggtggcggtaaaggcggacggcggattttacagcagcgcctcggtggctgcgccggag
cagtggcaaacgctgctgcgctcggtgcggcaaacgatcaccgagatcggcacgcgcatc
accgacggggacgtgcggatcgccccgtaccggatcgggatggaaacggcgtgcacgcat
tgcgtgtacaagccggtttgccggtttgaggagtcgttggagggcagctcttatcaaatg
ttgagcaaacccgggaagcaggagatatggacgcttctggaacaggggcggcggatggag
acaggacgcgaaggcgggcaaaaaagcgcccacgaaagcggaaaggaggctgcgtcatca
tga
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