Paenibacillus macerans: LMZ02_26795
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Entry
LMZ02_26795 CDS
T09394
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03030
DNA replication
pmae03430
Mismatch repair
pmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMZ02_26795 (holA)
03430 Mismatch repair
LMZ02_26795 (holA)
03440 Homologous recombination
LMZ02_26795 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmae03032
]
LMZ02_26795 (holA)
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_26795 (holA)
Enzymes [BR:
pmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMZ02_26795 (holA)
DNA replication proteins [BR:
pmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMZ02_26795 (holA)
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMZ02_26795 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
TctA
Motif
Other DBs
NCBI-ProteinID:
UMV47029
LinkDB
All DBs
Position
complement(6052339..6053358)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAKTAVKEIKQGRISPLYLCYGTEKYQIQEFVGLLQDKLVDRDQKDFAMAVFDLAETPI
EAVVEEAETLPFLVERKLIVVRDAGLFTAGKEGGKIEHKVEALQTYIGNPAEHSVIVFVV
YAEKLDERKKIVKAMKASGTALSFMPLGGGELVQWVVHEVEKRGCRIGKEAAEALIAAGG
VHMAALAAEADKLCLYAGTGGTIDTAAVEQLVARSTEQNVFAMVEHIAALRLEKALGIFY
ELLKQREEPIKIAALIARQFRIMMQVKELGRQSYSQQQIASQLALHPYVVKLAGEQARKF
EAGRLRDILSELAELDYRMKSGGVDKVLGLELFLLKLGA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggacgccaaaacagcggtaaaagagatcaaacaggggcggatctccccgttatattta
tgctacggtacggagaagtatcaaattcaagagtttgtcgggctgctccaggacaagctg
gtcgaccgggatcaaaaggacttcgccatggcggtgttcgatctggcggagacgccgatt
gaagcggtggtggaggaggccgagacgctgccttttctcgtcgagcgcaagctgatcgtc
gtccgcgatgccggattgtttacggccggtaaagagggcggcaaaatcgagcataaagtg
gaggcgctgcagacgtatatcggcaatccggcggagcacagcgtcatcgtgtttgtcgtt
tacgccgagaagctggacgaacgcaaaaaaatcgtgaaggcgatgaaggcttccgggacg
gccttgtcgtttatgccgctcggcgggggcgagctggtgcagtgggtggtgcacgaggtg
gagaagcgcggctgccggatcggcaaggaagccgcggaggcgctaatcgcggccggcggt
gtgcatatggccgcgctggcggcggaggcggacaagttgtgcctgtacgccggaaccggg
ggcacgatcgacacggccgccgtcgagcagcttgtcgcccgcagcacggagcagaacgtg
ttcgcgatggtcgagcatatcgccgcgctgcggctggagaaggcgctcggcattttctac
gagctgctcaagcagcgcgaggaaccgatcaagatcgcggcgctgatcgcccgccagttc
cggattatgatgcaggtgaaggaactgggccggcaaagctactcgcagcagcaaatcgcc
tcgcagcttgccctgcacccctatgtcgtgaagctggccggcgagcaggcgcggaagttc
gaagccgggcggctgcgggatattttatccgagctcgccgaactggattaccggatgaaa
agcggcggcgtcgacaaggtgctcggtttggagttgtttttgcttaaattgggggcttga
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