Paenibacillus macerans: LMZ02_28665
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Entry
LMZ02_28665 CDS
T09394
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pmae
Paenibacillus macerans
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmae03019
]
LMZ02_28665
Messenger RNA biogenesis [BR:
pmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMZ02_28665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UMV47376
LinkDB
All DBs
Position
complement(6483305..6484261)
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AA seq
318 aa
AA seq
DB search
MTLIKQLKNQDEFVGFYLLKELEVKQTNANPPKDYLDIVLCDATGEMPAKFWDASQTDKE
TFFPMGLVKVRGVVQTYREKLQVKIMQIRPAKAEDGVTLTDFIRSAPISPDDLIYTIQSV
IADIDDDEIREIVRYCVGKVKEKLSHYPAAKTHHHAYFGGLAYHMVRMLEIGDFLCRQRP
FLNRDLLKAGIILHDIAKPEEMVAQLGIVSEYSVQGKLVGHIAMASSWITEAAIRLGIDP
DSPKVLGLQHLVLSHHNLGEWGSPVQPQMAEAVALHHIDALDAKLQMVEDALNTTPETEE
WTPFIRGLENKAIYRLKW
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgactttaatcaagcagctcaagaaccaggatgaattcgtcggcttctatttgctcaag
gagctggaagtgaagcagacgaacgccaatccgcctaaggactatttggacatcgtatta
tgcgacgcaaccggggagatgccggcgaaattttgggacgcttcgcagacggacaaggag
acgttttttccgatggggctcgtgaaggtacgcggggttgtgcaaacctaccgggaaaag
ctgcaggtcaaaatcatgcaaatccgcccggccaaagcggaggatggtgtgacgctcacg
gattttatccgctccgcgccgatttcgccggacgatctgatttatacgattcaatcggtt
atcgcggacatcgacgacgacgaaattcgcgagatcgtccggtattgcgtcggcaaggtg
aaggagaagctgtcccattacccggcggcgaaaacgcaccatcacgcctatttcggcggg
cttgcttaccatatggtgcggatgctggaaatcggcgattttctgtgccggcagcggccg
ttcctgaaccgcgatctgctgaaggcgggcattatactccacgacatcgccaagccggag
gagatggtcgcgcagctcggcatcgtgtccgaatacagcgtgcagggcaagctggtcggg
catatcgcgatggcctcgagctggatcaccgaggcggcgatccgtcttggcatcgatccc
gattcgccgaaggtgctggggctgcagcatttggtgctctcgcaccacaacctgggcgaa
tggggcagcccggtgcagccgcaaatggcggaagcggtcgcgctgcaccatatcgatgcg
ctggacgccaagctgcaaatggtggaggacgcgttgaatacgacgccggaaaccgaggag
tggacgccgttcatccgcggtttggagaacaaggcgatctaccgcttgaagtggtga
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