Paenibacillus macerans: LMZ02_28960
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Entry
LMZ02_28960 CDS
T09394
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03420
Nucleotide excision repair
pmae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMZ02_28960
03430 Mismatch repair
LMZ02_28960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_28960
Enzymes [BR:
pmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMZ02_28960
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMZ02_28960
MMR (mismatch excision repair)
Other MMR factors
LMZ02_28960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
AAA_19
SLFN-g3_helicase
PhoH
Viral_helicase1
AAA_30
DEAD
AAA_11
NACHT
nSTAND3
Mg_chelatase
ResIII
AAA_16
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
UMV47428
LinkDB
All DBs
Position
complement(6565152..6567524)
Genome browser
AA seq
790 aa
AA seq
DB search
MEHFQSAYQEEKARLDRTLEEIERQLKELRSIPVYTGHDFTEQLLEANRESQRKQLEQSE
REPYFGRLDFAEAGRKRTPIYIGKVGVGDPEAGHPLVIDWRAPIASLFYSFTGGDEASYL
APEGLIDGLVYLKRNIVIRKGILERVADTYDRDSDGPAVSDEFLVYRLGENKDNRLRDIV
STIQAEQDQIIRAAKNTALIIQGVAGSGKTTVALHRLAFLLYQYKEQISAERLVIFAPNH
MFIDYISEVLPELGVGDIQQNTFSDWAARVLGLEEGPSDGTEALSHWFDGDWPGQPQGRS
QAEGQAQEQKLRQGIAQWQAQTKDQAEEQDQVKEQDQVKEQVPAQGLGRKQMHGGAQVQE
SPDDNKLPGRFKGSMHFKSLIDAYLENLESICVPEGDFEPWDGACLSRKEIIGWFEGEYR
HYPVARRKERVLARIHRWIEMELKKPSSAAALKERKKKAQQREKAYAKKWPELAPLNLYR
GLFGIRRSGGTADSGLADMAGRIPREIWRETQGYLKKNNLKEEDLPALLYLYSVVNEIDG
KMTFDHVVIDEAQDFSPFQVYVLDRFVKGHSFTILGDLSQGIHYYKGVRSWEEMQNLFRP
EETAYFALTRSYRSTMEIIEFANEILKRGVGTDLLAVPVFRSGEPVRLLPAAGERRFGAI
RYALDKALSGTYRTVAILTRTMREAEELHEELHKGLTKNGTEINLINGELKEYAGGVSVL
PVYLSKGLEFDAVIVTDVDPLHYGPEEAKLLYVGCTRALHELWLLHGDELPDYVPGEDTD
FAVRAAVEGF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
gtggaacattttcaaagtgcctatcaagaagaaaaggcgcggctagatcgcaccctggaa
gagatcgaaaggcagctgaaagagctgcgcagcatccccgtatacacggggcatgatttt
acggagcaactgcttgaggcaaaccgcgaatcgcaaaggaaacagctggagcagtcggag
cgtgagccttatttcggccggcttgattttgcggaagcgggcagaaaacggacgccgatc
tatatcggcaaagtgggcgtcggcgacccggaagcggggcacccgctcgttatcgattgg
cgcgcgccgatcgccagtttgttttattcttttaccggcggggatgaggcttcttatctt
gctcccgaaggcttgattgacggactggtgtacctgaaacgcaacatcgtgattcgcaag
ggcattctcgaacgggtggcggatacgtacgaccgcgacagcgacggaccggccgtaagc
gacgagtttctcgtgtaccggctcggcgaaaataaggataatcggcttcgcgatatcgtt
tcgacgatccaggccgagcaggatcaaattatccgtgcggccaaaaatacggcgttgatc
atccagggggtcgccggcagcgggaaaacgaccgtggcgctgcatcggctggcctttttg
ctgtaccagtacaaagagcagatttctgcggaacggctggtcatttttgcgccgaatcat
atgtttatcgactacatttccgaagtattgcccgaactgggggtcggggatatccagcaa
aatacgttcagcgattgggcggcccgggtgcttggcttggaggaggggccgtctgacggg
acggaagcgctgtcgcactggtttgacggagactggccgggacagccgcaagggcggagc
caggcggaaggacaggcgcaggagcagaagctgaggcaggggatcgcgcagtggcaggct
cagacgaaggatcaggcggaagagcaggatcaggtgaaagagcaggatcaggtgaaagag
caggtaccagcacaggggctgggacggaagcagatgcatgggggcgcccaggttcaggaa
agcccggacgataacaagctgcccggccggtttaaaggctccatgcattttaagtcgtta
atcgatgcctatctggaaaacctggagtccatctgcgtgcccgaaggggactttgagcct
tgggacggggcgtgtttatcccggaaggagatcatcggctggtttgaaggcgaataccgc
cattacccggtcgcccggcgcaaggaacgggtgctggcgcggattcaccgctggatcgaa
atggagctgaagaagccgtcttccgcggcggcgctgaaggaacgcaaaaagaaggcgcag
cagcgggaaaaagcatacgccaaaaagtggcctgagctcgctccgcttaacctgtaccgg
ggtctgtttggcatccggaggagcggcgggacggcggactcgggccttgcggatatggcg
gggcggattccgcgggagatttggcgggaaacgcagggctatttgaagaaaaacaacctt
aaggaagaagatctgcccgcactgttgtatctgtactccgtggtcaacgaaatcgacggg
aaaatgaccttcgaccatgtggtgatcgacgaggcccaggatttttcgccgtttcaggtg
tatgtgctggaccggttcgtcaaagggcattcgtttacgatcctgggagacttgtcgcag
ggcattcactattacaaaggcgtaagaagctgggaggaaatgcagaacctgttccgtccg
gaggagacggcttactttgcgttgacccgaagctaccgctcgacaatggagatcattgag
ttcgccaacgaaatattgaagcggggcgtgggaacggatttgcttgccgtcccggtgttc
cgcagcggggagccggtgcggctgctgccggcggccggagaacggcgcttcggcgcaatc
cgttacgccttggacaaggcgctgtcgggcacgtaccggacggtggcgattctgacgcgg
acgatgcgcgaagcggaggaactgcatgaggaactgcataagggactgacgaagaacggt
accgagatcaacctgattaacggggaactcaaggaatatgccggcggggtgtcggtgctg
cccgtgtatttgtccaaagggctggaattcgacgcagtgatcgtgacggacgtcgacccg
cttcactacgggccggaggaagccaagcttctttacgtcggctgcacccgcgcgctgcat
gagctgtggctgctgcatggcgacgagctgccggactacgttcccggagaagacaccgac
ttcgccgtccgcgcggctgtggagggattttga
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