Paenibacillus macerans: LMZ02_29080
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Entry
LMZ02_29080 CDS
T09394
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMZ02_29080 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_29080 (ruvB)
Enzymes [BR:
pmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMZ02_29080 (ruvB)
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMZ02_29080 (ruvB)
RecFOR pathway proteins
LMZ02_29080 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
AAA_22
nSTAND3
AAA_14
AAA_18
NB-ARC
NTPase_1
Sigma54_activ_2
RNA_helicase
AAA_3
TsaE
Resolvase
Rad17
AAA_2
Bac_DnaA
AAA_24
AAA_17
AAA_28
AAA_25
DUF815
ABC_tran
AAA_33
NPHP3_N
NACHT
IstB_IS21
TniB
RsgA_GTPase
bpMoxR
ATPase_2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UMV51003
LinkDB
All DBs
Position
complement(6595507..6596511)
Genome browser
AA seq
334 aa
AA seq
DB search
MEDRIISANLMMEDQAVELSLRPRYLAEYIGQSQIKENLKIYIEAAKMRNEALDHVLLYG
PPGLGKTTLANIIANELGVNIRTTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLHRTV
EEVLYPAMEDFALDIMIGKGPSARSVRLDLPPFTLVGATTRAGLLSAPLRDRFGVVSRLE
FYTIDELSFIVSRGADIFGIEMVGDAAEEIALRSRGTPRIANRLLRRVRDYAQVRGDGMI
TTDIAKEALKMLQVDPMGLDLIDHKMLRAMITSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFLQRTPRGRMVTPAAYQHLGLPMPETP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccggatcatatcggcgaatttgatgatggaggatcaggccgtcgagctgagc
ctccgtccccgctacttggcggaatatatcggacaaagccaaatcaaggaaaatttaaaa
atctacatcgaagcggcgaaaatgcgcaatgaagcgctggaccatgttttgctttacggg
ccgccgggactgggcaaaacgacgctggcgaacatcatcgccaacgagcttggcgtcaac
atccgcacaacgtcgggcccggcgattgaacggcccggcgatttggccgccctgctgacg
aatctgcaggaaggcgatgtgctgttcatcgacgaaattcaccgcctgcaccgcacggtt
gaagaagtgctgtatccggcgatggaggatttcgcgctggacatcatgatcgggaaaggg
ccaagcgcccgctcggtccggctcgatttgccgccgtttacgctggtgggggcgaccacc
cgggcaggcctgttgtcggcgccgctgcgcgaccgcttcggcgtcgtcagccgcctcgag
ttctatacgatcgacgagcttagcttcatcgtatcccggggagccgatattttcggcatc
gaaatggtcggcgacgccgccgaggagattgctttaagatcgcgagggacgccgcggatt
gcgaaccggctgttaagacgcgtccgggattacgcgcaggtgcggggcgacgggatgatc
acgacggacatcgccaaggaggcgctaaagatgctgcaggtcgatccgatgggactcgat
cttatcgatcacaagatgctgcgggcgatgattacgagcttccggggaggtccggtcgga
ctcgatacgattgcggcaacgattggcgaagaaagccaaacgatcgaagacgtgtacgag
ccatatttgctgcagatcggatttttgcagcgaaccccgcgcggccgtatggtgaccccc
gcagcttaccagcatttggggctgcccatgccggaaaccccttag
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