Paraperibacillus marinus: V1498_00115
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Entry
V1498_00115 CDS
T11218
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf03030
DNA replication
pmaf03430
Mismatch repair
pmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V1498_00115 (dnaX)
03430 Mismatch repair
V1498_00115 (dnaX)
03440 Homologous recombination
V1498_00115 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaf03032
]
V1498_00115 (dnaX)
03400 DNA repair and recombination proteins [BR:
pmaf03400
]
V1498_00115 (dnaX)
Enzymes [BR:
pmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V1498_00115 (dnaX)
DNA replication proteins [BR:
pmaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V1498_00115 (dnaX)
DNA repair and recombination proteins [BR:
pmaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V1498_00115 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
AAA_assoc_2
AAA_22
TIP49
AAA_5
AAA_19
DnaX_C
AAA_7
AAA_16
Rad17
TPR_P4H
PIF1
RNA_helicase
RCF1-5-like_lid
AAA_28
AAA_18
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
XNZ80498
LinkDB
All DBs
Position
24852..26531
Genome browser
AA seq
559 aa
AA seq
DB search
MGYQALYRVWRPQSFLDVVGQGHVTKTLQNALLQDKISHAYLFSGPRGTGKTSAAKILAK
AVNCENGPSAEPCNECSACRGITDGSIPDVIEIDAASNNGVEEIRDIRDKVKYAPNAVKY
KVYIVDEVHMLSIGAFNALLKTLEEPPRHVIFILATTEPHKIPLTIISRCQRFDFKRIGT
RDIVGRMRQIADSSGVNCSDQAMDIIARAAEGGMRDALSLLDQAISFSEDQVTEEDALTV
TGAVSQSFLTKLAYAIHEKDVAKALDILERLLSLGKDPSRFIEDMIFYYRDMLLYKTAPG
LSEALERVWVDDDFKQLADQIQPDDLYGMIESFNATQQEIKWTNHPRVFIEVALVKLCHR
ESGGSASTEGYQELLQKISLLESQISELKEKGIAVSGMQAAAKPKPQRTGKKQFKAPAGR
INAILKEATKQDLNTVKGQWGEMLEQLVKQQMKSSVALLNDAEPVAASTDAFVVKFKYDI
HCQMAMENARFLEAVGGIILQTTGRKLSMIGVPEDQWGKIREEYLASQSTDKVETKDVED
PFIAEARRLVGDELLEIKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgggatatcaagcattatacagagtttggaggccgcagtccttcttagatgtagttggc
cagggtcatgtgaccaaaaccctgcagaatgcactcctgcaggacaaaatctcccatgcc
taccttttttccggcccgaggggcacagggaaaacaagtgcagccaaaattctggccaaa
gctgtgaactgtgaaaatggaccttctgccgaaccatgcaatgaatgttctgcatgcagg
ggaattacagacggctccataccagatgtgattgagatcgatgcagcttcaaataacgga
gtggaagaaatacgcgatatccgcgacaaggtaaaatacgctccgaatgcagttaagtat
aaagtgtatatagtggatgaagtccacatgctttccataggggcgtttaacgcgcttctt
aagactcttgaagagcccccgcggcacgtcatcttcatcctggccacaaccgagccccat
aaaatccccctcaccatcatctcacgctgtcagcgctttgactttaagagaattggaacc
agggacattgtagggcggatgagacagattgccgacagttcaggggtgaactgcagtgac
caggccatggatatcattgcccgcgctgctgaaggcgggatgcgtgatgcgctcagtctc
cttgaccaggcgatatccttcagcgaggaccaggtgacagaggaggatgccctcacagtt
accggggcggtttcccagtcatttctgacaaagcttgcgtatgccatccatgaaaaggat
gtggcaaaggcgcttgatatcctggagcggctgctgtcactcggaaaagatccatcccgt
tttattgaggacatgattttttactaccgggatatgcttctctataagaccgcacctggc
ctgtccgaggcacttgaacgggtctgggtcgatgatgactttaagcagcttgccgatcaa
atccagccggatgatttatacgggatgatcgagagcttcaatgctacacagcaggaaatc
aaatggaccaatcacccgcgggtgttcatagaagtggcgcttgttaagctctgccacagg
gaaagcggaggaagtgcttccacagagggctatcaggagctgctgcagaaaatcagcctg
ctggaaagccaaatcagcgaattgaaagaaaaagggatagccgtatccggcatgcaggca
gctgccaaaccgaaacctcaaaggactggcaaaaagcaatttaaggcgccggccggaagg
atcaacgctatccttaaggaagctacaaaacaagatcttaatacggtcaaaggccaatgg
ggagagatgctggaacagctggtcaagcagcagatgaaatcttcggtcgcactcttgaat
gatgctgaaccagtagctgcctcaacagatgcttttgtggtaaaatttaagtatgatatt
cattgccagatggcgatggaaaatgccaggttcctcgaggcagtgggcggcattatcctg
cagaccacagggagaaagctttccatgattggagttcctgaggaccaatggggtaaaatc
agggaagagtatcttgcttcacaatccactgataaggtggaaaccaaagacgtggaagac
cccttcatcgcagaggcgagaagacttgttggggatgaactgctggaaatcaaagaataa
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