Paraperibacillus marinus: V1498_01125
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Entry
V1498_01125 CDS
T11218
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf00750
Vitamin B6 metabolism
pmaf01100
Metabolic pathways
pmaf01240
Biosynthesis of cofactors
Module
pmaf_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
V1498_01125 (pdxS)
Enzymes [BR:
pmaf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
V1498_01125 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
His_biosynth
NMO
IGPS
DUF188
Motif
Other DBs
NCBI-ProteinID:
XNZ80657
LinkDB
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Position
complement(201217..202101)
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AA seq
294 aa
AA seq
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MSQLLTGTDRVKRGMAHMQKGGVIMDVINAEQAKIAEASGAVAVMALERVPSDIRAAGGV
ARMADPRIVEEVMNAVTIPVMAKARIGHIVEARVLEAMGVDYLDESEVLTPADEEFHLQK
NTFTVPFVCGCRDLGEAARRIGEGASMLRTKGEPGTGNIVEAVRHMRTVNAQIRKITHMS
EDELMTEAKNLGAPFHILLEIRREGRLPVVNFAAGGIATPADAALMMELGADGVFVGSGI
FKSDNPEKFARAIVQATTHYQDYKLIAELSKQLGTAMKGIEISKLTAEERMQGR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaactacttactggtaccgaccgtgtcaaaagaggaatggctcacatgcaaaaa
ggcggagtcatcatggatgttatcaatgccgaacaggcaaaaattgccgaagcttccgga
gctgtggctgtcatggccctggagcgggtgccttcagatatcagggctgccggcggtgta
gcaagaatggctgatccgcgtatcgtcgaagaagtcatgaacgcagtcaccatccctgta
atggcaaaggcccgcatcggccatatcgttgaagcacgcgtccttgaagcaatgggtgtg
gattacctggatgaaagcgaagtgctgactccagccgatgaagaattccatctgcagaaa
aatacattcaccgttccctttgtctgcggctgccgcgacctgggtgaagccgccagaaga
attggcgaaggtgcctccatgctccgcaccaaaggagaaccgggaacaggaaacatcgtt
gaggccgtccggcacatgcggaccgtcaacgcccaaattcgaaaaatcacccacatgagc
gaagatgaactcatgaccgaagcaaaaaaccttggtgctccttttcacatcctgcttgaa
atcaggcgcgaaggccgcctcccggtcgtcaacttcgccgccggcggcatcgccacaccg
gctgacgccgccctcatgatggaactcggcgcagacggcgtattcgtaggatccggcatc
ttcaaatcagacaacccagaaaaatttgcccgcgccatcgtccaggcaaccacacactac
caggactacaaactcatagccgaactatccaaacaactcggcaccgccatgaaaggaatc
gaaatctcaaaactaactgctgaggaaagaatgcaaggacgatga
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