Paraperibacillus marinus: V1498_02195
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Entry
V1498_02195 CDS
T11218
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf03420
Nucleotide excision repair
pmaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1498_02195 (pcrA)
03430 Mismatch repair
V1498_02195 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaf03400
]
V1498_02195 (pcrA)
Enzymes [BR:
pmaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1498_02195 (pcrA)
DNA repair and recombination proteins [BR:
pmaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1498_02195 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
V1498_02195 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNZ80831
LinkDB
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Position
425940..428165
Genome browser
AA seq
741 aa
AA seq
DB search
MQFLSDRLLKGLNDKQQEAVKCTDGPLLIMAGAGSGKTRVLTHRIAYLMVEKQVAPWSIL
AITFTNKAAREMKERIKGILGGASEDIWISTFHSMCVRILRRDIDRIGYNRNFTILDTTD
QQSVIKQILKDKNLDPKKFDYRAILGSISSAKNELIDAEEYASMSGGFFEQTVAEVYTEY
QKRLRKNQALDFDDLIMKTILLFTRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKLMA
ARFKNLCVVGDSDQSIYRWRGADIANILSFEKDYPNAEVILLEQNYRSTKRILRAANEVI
SKNANRKPKNLWTENLEGNKILYYRADSEQGEAQFVAGKINEMTAGGRKLSEIAILYRTN
AQSRVMEEVLLKSNIQYSIVGGIKFYDRKEIKDILAYLRLISNPDDDISLRRVINVPKRG
IGSTSLDKIANFAAMYDTSIMAALDSIELIGVSPKITKAAASFRDLINSYSQMQEYLSVT
ELVEQVLEKSGYREMLEAERTIESQSRLENIDEFLSVTKSFEESSDDKSLVAFLTDLALV
ADIDALDDDGEAPADSVVLMTLHAAKGLEFPVVFLMGLEEGVFPHSRSLMEEEEMEEERR
LAYVGITRAENELYMTNAQMRTLFGRTNMNPVSRFISEIPEDLLEDLVPKQPKAKSSSFM
TSGQPARTRPGVQRPSAMKQNTTGGDEIGWNVGDKAVHKVWGTGTVVSVKGEGEGKELDI
AFPSPTGIKRLLAKFAPITKG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttctttcagaccggctattaaagggattgaatgacaagcagcaggaagcagtg
aaatgcacagacggacccctcctgatcatggcaggggcaggaagcggaaaaacaagggtg
ctgacgcacaggatcgcgtatttaatggtggaaaagcaagtggctccgtggagcatcctt
gcgattacctttaccaataaagcggcccgcgaaatgaaggaaaggatcaaaggaatcctt
gggggagcctccgaggatatctggatctccacctttcactcaatgtgtgtaaggattctc
aggagagatatcgaccggattggctataaccggaactttaccatcctggatacgacggat
cagcagtctgtcatcaagcagattctgaaggataagaaccttgatccgaaaaagtttgat
taccgggcgatacttggcagcatttcatcagcaaagaatgaactcatcgatgcagaagaa
tatgcaagcatgtccggcggtttctttgaacagaccgttgccgaggtttataccgagtac
caaaaaaggctcaggaaaaaccaggcgctcgactttgacgacctgatcatgaaaaccatc
cttctgttcacaagagtgccggaggtattggaattctatcagcgcaagttccagtatatc
catgtggatgagtatcaggatacgaaccgggcgcaatatatgctggtcaagctgatggca
gcgcgcttcaagaacctctgcgtggtcggtgattctgatcagtcgatctaccgctggcgg
ggtgcggatattgcgaacatcctgagcttcgaaaaggactatcccaatgccgaggttatc
ctgcttgagcagaactaccgctcaacgaagcggattctccgcgcagcgaatgaagtcatc
tcaaaaaatgcgaaccgcaagccgaagaatctatggaccgaaaacctggaaggcaataag
atcctttattaccgggcggacagcgagcagggagaagcccagttcgtggcagggaaaatc
aatgaaatgacggcaggcggcaggaagctgtccgagattgccatcctgtaccgtaccaat
gcccagtcccgtgtgatggaggaagttttgctgaagtcgaatatccaatattcgatcgtc
ggcggaatcaagttctatgacaggaaagaaatcaaggacatcctggcatacctgcgcctg
atttcgaatcctgatgacgatatcagcctgcggagggtgatcaatgtaccgaagagggga
atcggatccacctcccttgataaaatcgccaacttcgctgcgatgtacgatacctccatc
atggcggccctcgattcgattgaactgattggtgtcagcccgaagatcacaaaggcagcg
gccagttttagagatttgatcaacagctactcccagatgcaggaatatctgtcggtgaca
gagcttgtggagcaggtgcttgaaaaaagcggataccgtgagatgcttgaagcggagaga
acgattgaatcccagagcaggcttgaaaatatagacgaatttctttctgtaaccaagagc
tttgaagaaagctcagatgataaaagtctggtggccttcctgacagaccttgccctcgtt
gccgatatagacgcacttgatgacgatggggaagctccggcggattcagttgtcctgatg
acactgcatgctgccaagggactcgagtttccggtcgtattcctgatgggactcgaggag
ggtgttttccctcacagccgctctctgatggaagaggaagagatggaagaagagcgccgg
cttgcatacgtcggcatcacccgtgcggaaaatgagctgtatatgacaaatgcgcagatg
cgtactttattcggacgcactaacatgaacccggtttcccggtttatatccgaaataccc
gaggacctccttgaagatctcgttccaaagcagccgaaggccaagagttcctccttcatg
acttccggccagccggcacgcacccgcccgggtgtccagcgcccaagcgcaatgaagcag
aatacaacaggcggagatgaaatcggctggaatgtaggcgacaaagcagtgcacaaggta
tggggaacaggcacggttgtcagtgtcaaaggcgagggagaaggcaaggagcttgatatt
gctttcccaagcccgaccgggatcaaacgattgctcgctaaatttgcccccatcactaag
gggtag
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