Paraperibacillus marinus: V1498_05910
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Entry
V1498_05910 CDS
T11218
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1498_05910 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaf03400
]
V1498_05910 (ruvB)
Enzymes [BR:
pmaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1498_05910 (ruvB)
DNA repair and recombination proteins [BR:
pmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1498_05910 (ruvB)
RecFOR pathway proteins
V1498_05910 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_14
nSTAND3
AAA_22
NB-ARC
TIP49
AAA_3
DUF815
RNA_helicase
AAA_18
AAA_24
Rad17
AAA_25
NTPase_1
TsaE
AAA_17
AAA_28
AAA_33
Sigma54_activ_2
NPHP3_N
NACHT
IstB_IS21
ABC_tran
Bac_DnaA
Parvo_NS1
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
XNZ81506
LinkDB
All DBs
Position
1183998..1184999
Genome browser
AA seq
333 aa
AA seq
DB search
MDDRIVNQEADSAELSYELSLRPQNLRQYIGQDKVKSNLEIFIEAARMRSETLDHVLLYG
PPGLGKTTLAAIIANEMGVNLRTAAGPAIERPGDLAAILSALQPGDVLFIDEIHRLPRAV
EEVLYPAMEDFCLDIVIGKGPAARSVRLDLPPFTLVGATTRAGSLSAPLRDRFGVLSRLE
YYTVEQLKQIVVRTAEILETEIDGEAADEIARRSRGTPRIANRLLRRVRDFAQVRGNGLV
TMAMAGQALELMQVDRLGLDHIDHKLLKGIIERFRGGPVGLDTISATIGEESHTIEDVYE
PYLLQIGFIQRTPRGRIATPLVYEHFNIEMPTA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagaatagtaaaccaggaagcagactctgccgaactatcatatgagttaagt
ctgcgtcctcagaatttaaggcagtacatcgggcaggacaaggtgaaatccaatcttgaa
atcttcatagaggctgcgagaatgcggtctgagacgcttgatcatgtcctgctgtacggt
ccgccgggtcttggtaaaacaacccttgcggcaatcatcgcgaatgaaatgggtgtgaat
ctcaggacggctgccggtcctgctatcgagaggccgggagatcttgcggccatcctcagc
gccctgcagccgggggatgtgttattcatagacgagatccacaggctgcctagagctgta
gaggaagtgctgtatcctgcgatggaggatttctgcctggacatagtcattgggaaaggg
cctgcagcgcggtctgtaaggcttgatctgcctcccttcacactggtgggagcgactacc
agggccggctctttatccgccccgctcagggaccgcttcggggtccttagcaggctggag
tattacacagtggaacagctgaagcaaattgtcgtacggacagctgaaatcctggagact
gaaatcgatggggaagcggcagatgaaatagcgagaagatccaggggaacacccaggatc
gccaaccgcctcttaaggagggtccgtgacttcgcacaggttagggggaacgggcttgtc
acaatggcaatggccggtcaggccctggaattgatgcaggtggaccgtttaggactggat
catattgaccataaattacttaaagggatcattgagcgtttcaggggcggtccggtgggg
ctggatactatttcagccaccataggggaggaatcccatacgatcgaggatgtatatgaa
ccttacctgctgcagatcgggtttatccagagaacacctcgcggaaggattgccaccccg
ctcgtgtacgagcattttaatatcgagatgccgactgcatag
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