Paraperibacillus marinus: V1498_14100
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Entry
V1498_14100 CDS
T11218
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1498_14100 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaf03019
]
V1498_14100 (pnp)
03016 Transfer RNA biogenesis [BR:
pmaf03016
]
V1498_14100 (pnp)
Enzymes [BR:
pmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V1498_14100 (pnp)
Messenger RNA biogenesis [BR:
pmaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V1498_14100 (pnp)
Transfer RNA biogenesis [BR:
pmaf03016
]
Prokaryotic type
tRNA degradation factors
V1498_14100 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KorB
SPATA25
OB_RRP5_4th
DUF3819
Motif
Other DBs
NCBI-ProteinID:
XNZ79004
LinkDB
All DBs
Position
complement(2799977..2802103)
Genome browser
AA seq
708 aa
AA seq
DB search
MEQNKQTFSLEWAGRPLTVEIGQLAKQANGAALIRYGDTVVLSTATASKEPKSVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSMVMSV
DQDCSSEMAAMFGSSLSLTVSDIPFEGPIAGVVVGRVDNKFIINPSISQMEKSDINLIVA
GTKDAINMVEAGADEVPEEVMLEAIMFGHDEIKRLIAFQEEIAAVVGKEKTQVALYEVDQ
DLEQEIRSLCEADINKAVQVQEKHAREDAIKQVKDRVVAQYEEKEADDAVIKQVKEILSK
FVKAEVRRLITEEKVRPDGRNPDEIRPLASEVGILPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPHFSVGETGFMRGPGRREIGHGALGERALEPVLPSEK
DFPYTIRLVAEVLESNGSTSQASICASTMAMMDAGVPIKSPVAGIAMGLIKSGENYTVLT
DIQGMEDHLGDMDFKVAGTAKGVTALQMDIKIEGLSRDILEEALQQAKRGRMHILEHMLT
AIAEPRTELSQYAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
TNEEMNRKAKQIIEDIVREVEVGALYLGKVKRIEKFGAFVEIFSGKDGLVHISELAEERV
GKVEDVLAIGDELLVKVLDIDKQGRVNLSRKAVLKEQKEQSEAANSNS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaataaacaaacattttccctggaatgggcgggccgtccgcttacagtcgaa
atcggccagctggccaagcaggcaaacggggctgcactgatccgttatggagatacggtg
gtactcagcactgcaactgcatcaaaggaaccaaaaagcgtcgatttcttcccgctgact
gtcaattatgaagaaaggctttatgcggtagggaaaatccctggcggattcattaaaaga
gaaggccgtccgagtgaaaaagcaatccttgccagccgcctgatcgaccgtccgatccgt
ccgctgttcgctgacggcttccgtaatgaagtccaggtagtgagcatggtaatgagcgtt
gaccaggactgttcttccgaaatggcagccatgtttggctcgtcactttctctgactgtt
tcggatatcccatttgaaggaccaatcgccggagtggttgtaggccgtgttgataataaa
ttcattatcaacccatccatcagccaaatggaaaagagcgacatcaaccttattgtggct
ggaactaaggatgccatcaacatggtagaagcaggtgccgatgaagtacctgaagaagtg
atgcttgaagccatcatgttcggccatgacgaaatcaaacgcctgattgctttccaggaa
gagatcgctgctgttgtcggcaaagaaaaaacacaagtggctctttatgaagtggatcaa
gacctcgagcaggaaatccgcagcctgtgtgaagccgatatcaataaggctgtgcaggtt
caggaaaagcatgcgagagaagatgcaatcaaacaggtaaaggaccgcgttgtagctcaa
tatgaagaaaaagaagctgatgatgctgtcatcaagcaggtaaaagaaatactttcgaaa
tttgtaaaagcagaagtgcgcaggctcatcacggaggagaaagtccgtccggatggaagg
aacccggatgaaatccgcccgcttgcctccgaagtcggcatcctgccccgcacacatggt
tcaggactgtttactaggggacaaacccaggctctttccatttgtacgcttggtgccctg
ggagatgttcaaatccttgacggcctcggtgtagaggaatcaaagcgcttcatgcaccac
tataacttccctcatttcagtgttggggaaaccggattcatgcgcggtccgggccgtcgt
gaaattggccatggagctcttggtgaaagggcccttgaaccggtattgccgtcagagaag
gatttcccgtacaccatccgtttggttgcagaagttcttgagtccaacggttctacttca
caggcaagcatctgtgcaagcacaatggccatgatggatgcaggtgtgccaattaaatca
ccggttgccggtattgccatgggtctgatcaaatctggcgagaactatacagtccttact
gatatccagggcatggaagaccacctgggcgatatggacttcaaggtggccggaacagcg
aagggtgttaccgccctgcagatggatatcaagattgagggtctatccagggacattctt
gaggaggcgcttcagcaggccaagcggggccgtatgcatatccttgaacatatgctcacc
gccattgctgagccgcgtacagagctttctcagtatgcaccgaagatcctgacaatgacg
atcaacccagataagatccgcgatgttatcggaccaagcggaaagcaaatcaacaaaatc
atcgaagaaacaggagtcaagatagatattgaacaggacggaacggtattcatctcgtcc
acaaatgaagaaatgaaccgcaaggcgaagcagattatcgaagatatcgtccgtgaagtg
gaagttggcgcgctttacctcggtaaagtaaagcggattgaaaagttcggtgcgttcgtt
gaaatctttagcggtaaagacggactggtccatatttccgaacttgccgaagagagagtc
ggtaaagtcgaggatgtattagccatcggtgacgaactccttgtcaaggtccttgatatt
gataagcagggcagggtcaacctatcccgtaaagcggtgctgaaggaacaaaaggaacaa
agcgaagctgcaaattccaattcataa
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