Paraperibacillus marinus: V1498_14835
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Entry
V1498_14835 CDS
T11218
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf00470
D-Amino acid metabolism
pmaf00550
Peptidoglycan biosynthesis
pmaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V1498_14835 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1498_14835 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmaf01011
]
V1498_14835 (murD)
Enzymes [BR:
pmaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V1498_14835 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmaf01011
]
Precursor biosynthesis
Amino acid ligase
V1498_14835 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
XNZ79144
LinkDB
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Position
complement(2951464..2952816)
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AA seq
450 aa
AA seq
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MKEVTKYIRKKVLVLGLAKSGVSAALLLHRLGAFVTVNDKKPIDENPEAQELVEQGIKVI
CGDHPIELLDEGFELIVKNPGIPYTIPLVKGAVERGLPVITEVELAYQISEAPFIGITGT
NGKTTTTTIIHEMLQEGGKKPLIAGNIGTVASGVASQAEKDNTIVIELSSFQLMGTMEFK
PHIAVLINLYDAHLDYHGSRQEYADAKGAIGKAQTEDDYFIYNADQEEVAALARRSKAAL
VPFSTKRKVEDGAYIEDGYMCFRGERVAALSEIVLPGRHNQENILSAIAAAKLSGVPNEA
IQTVLSVFKGVKHRTQFVAEINKRKFYNDSKATNILSASAALESFQEPTILLAGGLDRGN
EFDELKPALGNVKALITFGQTAPKIERVAKEAGISVIKRVDNVEAAVPAAYGLSEEGDCI
LLSPACASWDQYKTFEVRGDMFMEAVHKLK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaagttacgaaatatatcagaaaaaaagtcctggtactgggcctggccaagagc
ggtgtgagtgcagctctgctcctgcataggcttggagcctttgtgacggtcaatgataaa
aagccgatagacgagaaccctgaagcacaggagcttgtggaacagggcattaaggtgatt
tgcggggaccatcccattgaactattggatgagggatttgagttgattgtaaagaatccc
ggcattccttataccattcctttggttaaaggagctgtagaacggggtctgccggtgatc
actgaagtggagcttgcctatcagatttccgaggcaccatttataggaataacaggaaca
aacgggaagaccacgaccactacgatcattcatgaaatgcttcaggagggcggtaaaaaa
cctctgattgcaggcaatatcgggacagtggcctcaggtgtggcgtcccaggctgagaaa
gacaataccattgtcattgaattgtcttcattccagctgatgggcacaatggaattcaag
ccgcatattgctgtgctgatcaatctgtatgatgcccatctggattatcacggttcaagg
caggaatatgcagatgccaagggtgcgatcgggaaagcacagacagaggatgactatttc
atatataatgccgaccaggaggaagttgctgcgcttgccaggcgttcgaaagcagctctc
gtgcctttctctaccaagaggaaggttgaggacggggcatatatcgaggatggatatatg
tgcttcaggggtgaaagagtggctgctttgtccgaaatcgttcttccaggccgccataac
caggaaaatatcctgtctgccatagccgcggccaagctttccggtgttccaaatgaagcg
atccagaccgtcctgtctgtcttcaaaggagtgaagcaccgtacgcagtttgtggctgag
atcaataaacgcaaattctacaatgattccaaagcgacaaacattttatctgcttcagca
gcccttgaatcatttcaggaaccgaccatcctccttgcaggagggctggaccgtggaaat
gaattcgacgaactgaagccggcactggggaatgtgaaggcgctgattactttcgggcag
actgctcctaaaattgagagagtggcaaaagaagctggaatatctgtgatcaaacgtgtc
gataatgtagaggcagccgtgcctgcagcatacggactctcggaagaaggggactgcatc
cttctctcgcctgcttgtgcaagctgggaccaatataaaacttttgaggtcaggggagac
atgtttatggaggccgtgcataaacttaagtaa
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