Paraperibacillus marinus: V1498_16635
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Entry
V1498_16635 CDS
T11218
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pmaf Paraperibacillus marinus
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaf03400
]
V1498_16635 (addA)
Enzymes [BR:
pmaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1498_16635 (addA)
DNA repair and recombination proteins [BR:
pmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V1498_16635 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
ResIII
Dna2
Motif
Other DBs
NCBI-ProteinID:
XNZ79485
LinkDB
All DBs
Position
complement(3291482..3295228)
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AA seq
1248 aa
AA seq
DB search
MTKTMIPEKPLDATWTDAQWKAIWAKDQDILVAAAAGSGKTAVLVNRIIQKILSETDPVN
IDELLVVTFTNASAAEMRHRISGALETAIRENHASQHIRKQLSLVNRASISTLHSFCLEV
IRKYYYLIDADPGFRIADATEAEIMKDEIMEDLFEEHYADEGNERFFRLVDAFSSDRSDL
ALAEIVRALYEFSMSNPDPAGWLSEVVSLYEVQDAGTIDELPIAEHLLLDISLKLQAARD
YLNEALELSKAPGGPAPRAENFLDDLQIIERLEGAGGWDELYEFIQNVSFGTLKRASGKE
YIKDLADQSKKYRDSAKKIIDDLKKELFSRRPESFLRDMAELKGFAETLVMLAAQFRERF
SEAKKEKGLVDFSDLEHFCLQILSARDAEGVLIPSEAALDYRAKFKEVLVDEYQDTNMVQ
ETILNLVTSDGEENGNLFMVGDVKQSIYRFRLAEPNLFLQKYSRFTREGTDGGLKIDLNQ
NFRSRSEVLDGTNFLFKQIMGMTVGEIHYDEDAELKKGAPYPENEPYPIDLLLIDQSASG
ESEEEPGSSEGADSAFEGEELEKAQGEARLMARVIKEMIDERRPVFDAKTKTSRPVQYRD
IVILLRSMPWASQIMEEFKKQGIPIYANLSTGYFEATEVAIMMSLLKVIDNPLQDIPLAS
VLRSPIVGLNEEEMARIRLYSKGSSFYEAVSVFCREADAGTESAYEKVNLFHTRLGRWRT
MAREGSLSELIWELYSETRFYDFTGGMPGGKQRQANLRALYDRARQYEESSFRGLFRFLR
FIERMQERGGDLGAARALSEQEDVVRIMTIHSSKGLEFPFVFTAGLARQFNMMDIRKSYL
LDKDLGFAAKYVNPELQITYPSLAQLAFKKKKQLETISEEMRVLYVALTRAKEKLYLIGT
VKDAEKSLSDWAVHRTSKDWLLKNYVRAGAKSYMDWIGPAVVRHGSAAGILEAPPQGAAD
IESHPSRWNITIVGAGELAGEAEEAVTQDSWLDDVEKGEPVHFASGYSEAVKHQLEWQYG
HAEAAVLRSKQSVSELKRQLEIRDAETSTDLVDKFKKPYLTRPRFMQEKSISPSERGTIM
HTVMQHINLREDVSPERISEKVGELIQRELLTEDQAAAVSVPLISGFFETDIGRRLRSAH
SVQREVPFNLSLPAAEVYGDWKDGEERVLVQGVIDCIFEDDQGTVLLDFKTDAIQGRYYS
GFEGARDILADRYRTQISYYSTAIEQILKKPVTERYLFFFDGAHLLRL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgactaagacgatgattcccgagaagcccctggacgccacatggacagatgcccagtgg
aaggctatctgggcgaaggatcaggatatcctggtcgcagcagccgcgggctcaggaaaa
acggccgtcctcgttaacagaatcatacagaaaatactatcggaaacagatccggtcaac
atagatgaattgctagtggttaccttcaccaatgcgtcggctgccgagatgcgccatcgg
atatccggggcgctggaaacggccattcgtgaaaatcacgcttcccagcatatccggaag
cagctcagtcttgtaaacagggcttccatttcaacactccactccttctgtctggaggtt
atccgcaaatattattatctgattgatgccgatcccggcttccggatagcggacgccact
gaggctgaaatcatgaaggatgaaatcatggaagatttgtttgaggagcattatgcagat
gaaggcaatgaaagattcttccggctcgtggatgctttttctagtgaccggagcgacctg
gcgcttgctgagatcgtgcgggcgctctatgagttttccatgtccaacccggatccggcc
gggtggctgtcagaagtggtcagcctgtacgaggtccaggatgccgggacgattgatgaa
ctgccgatagcggagcatctgcttcttgatatttcgctgaagcttcaagcggcaagggat
tacctgaatgaagcccttgagctgtccaaggcaccgggcggccctgccccgagagccgag
aatttccttgatgacctgcagatcattgagcgtcttgaaggggccgggggctgggatgaa
ttatatgaattcatccagaacgtatcattcggaaccctaaagcgtgcatccggcaaggaa
tatatcaaggatctggcagatcagtcaaagaaataccgggacagtgccaagaaaattatt
gatgacttgaaaaaagaacttttctcccgcagaccggaaagcttcctcagggatatggca
gagctgaaggggtttgcggaaaccctggtcatgcttgctgcccagttcagggagagattt
tccgaggcgaaaaaggaaaaagggctggtcgatttttctgacctggagcatttctgcctg
cagatcctttcggcgcgggatgccgaaggagtgctcatcccttccgaggctgcccttgat
tacagagcgaagttcaaggaagtgcttgtggatgaataccaggacaccaatatggtccag
gaaaccatcctgaatctggtgacgtcagacggggaagagaacggcaatctgtttatggtt
ggcgacgtcaagcagagcatctaccggttcaggctggcagagcccaaccttttccttcag
aaatacagccgctttacccgtgaagggacagacggcgggctgaaaatcgacttaaaccag
aacttccggagccgcagcgaggtgcttgacggcacgaacttcctgttcaagcagatcatg
ggtatgaccgtcggcgagattcattatgatgaagatgctgaattgaaaaaaggcgcgcct
tatccggaaaatgagccgtatcctatagacctcctgctgatcgaccagagcgcctccgga
gaatcggaggaagagcctggaagcagcgaaggggccgattctgcctttgagggggaggag
cttgagaaggcacagggtgaagcgcgcctgatggcaagggtcatcaaggagatgattgat
gaaagaaggccggtttttgatgcgaaaacgaagacgagccggccggtacagtatagggat
attgtgattctgctgcgctccatgccctgggcctcccagatcatggaggagttcaagaag
cagggaatcccgatctatgccaacttatcaacaggttattttgaagcaacagaggtagcc
atcatgatgtccctcctgaaagtgatcgataaccctctccaggatatcccgctcgcttct
gtattaaggtctcccattgtgggactgaatgaggaagaaatggcgaggatccgtctttat
tcaaagggatcatccttttatgaggcggtttctgtattctgcagggaagcggatgccggg
acggaatcagcttatgagaaagtcaatctgtttcataccagattgggaagatggagaacc
atggcgagagaaggctcgctgtccgaactgatctgggagctgtacagtgaaacaagattt
tacgattttaccgggggaatgcctggagggaagcagcggcaggcgaatctgcgtgcttta
tatgaccgggcaaggcagtacgaagaaagctctttccggggccttttccgtttccttcgc
ttcattgagagaatgcaggaacgcggcggggaccttggggcagccagggcgctgagtgag
caggaggatgttgtccggattatgaccattcactccagcaaggggctcgaattcccgttc
gttttcacggccggcctcgctcggcagttcaatatgatggatatccgcaaaagctatctt
ctggataaggatcttggctttgcagcaaaatatgtgaatcctgagctgcagatcacctac
ccgtcactcgcacagcttgccttcaagaaaaagaaacagctggaaaccatctctgaagaa
atgcgtgtgctgtatgtagccctgacccgggctaaagaaaagctgtacctcatcgggacc
gtaaaggatgccgaaaagagcctgagcgactgggcggtacaccgcacatccaaagactgg
ctcctgaaaaattatgtaagggcgggagcgaaaagctatatggactggatcggccctgca
gtcgtccgccacggaagcgcagcaggcattcttgaagctcctcctcagggcgcggctgat
attgaatcgcatccttcccgctggaatatcacgattgtaggggcaggggagcttgccggc
gaagcggaagaagccgtgacgcaggacagctggctggatgatgtggaaaagggagagcct
gtccattttgcttcaggatacagcgaggccgtgaaacatcagctggaatggcagtatggc
catgccgaggccgctgtcctccgttccaagcagtcggtgtcagagctcaagcgccagctt
gaaatcagggatgcggaaacctcgacggatttagtggataagttcaagaaaccgtatctt
acgcgaccccgctttatgcaggaaaaatccatttcaccgtctgaacggggaaccatcatg
catactgtcatgcagcatatcaacctgcgggaggacgtgtctcctgagcgcatcagcgag
aaagtgggagagctgattcaaagggaactgctgaccgaagatcaggcggctgctgtaagc
gtgccgctgatctccggattcttcgaaacagatattggccggcgtctcaggagtgcccat
tcggtgcaaagggaagtgcccttcaatctatccttacctgcagccgaagtttatggagac
tggaaggacggggaggagagggtgcttgtccaaggcgtcatcgactgcatctttgaggac
gatcaggggacagtactgctcgactttaagaccgatgccatacaggggagatattacagc
ggctttgaaggggccagggatatcctggcagacagataccggacccagatttcttactat
tcaacagccattgaacaaatcctgaaaaaaccagtaacagaacgttatttatttttcttt
gacggcgctcatctgctccggttataa
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