Paraperibacillus marinus: V1498_20180
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Entry
V1498_20180 CDS
T11218
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
pmaf Paraperibacillus marinus
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaf01002
]
V1498_20180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmaf01011
]
V1498_20180
Peptidases and inhibitors [BR:
pmaf01002
]
Cysteine peptidases
Family C40
V1498_20180
Peptidoglycan biosynthesis and degradation proteins [BR:
pmaf01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
V1498_20180
SSDB
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Paralog
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM1_NFP_LYK
CHAP
LysM_OapA
LRAT
LysM3_NFP
Transglut_prok
Motif
Other DBs
NCBI-ProteinID:
XNZ80123
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Position
3994885..3995928
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AA seq
347 aa
AA seq
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MKKTIAALTASIIISSSLVPSALAASYKVKSGDTLSKIAQNNGVTVAQLKQMNKLKNDAI
FLGQTLQVPDKKPAAKPAPKPAAPKQTVYTVVKGDSLDKIARKYKTTVSSLKKWNSLKND
TIKLGQKLKVTAPKPAPKPAVKPAPKPVQPPTAPAVNYIVQPGDSLWLISSKYGVTTADL
IQANKLKTESIKAGQKLVIPNPKKTPAVPAPAPAKAPAKPTETQAVKIQQAIEEGHKYLG
VPYLYGGSTPAGFDCSGFAYYIFSRTGFDIKRTSSANYFGQGQTVTQPQAGDFIFFSPSP
GSPSITHMGIYIGDGRFIHADSTKGITVTSTEVSYFKTRFLGYKRLF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagacgattgcggcattgactgcttctattataatatccagcagtttggttcct
tctgccttagcggcttcctataaggtgaagagcggcgacactctcagcaagattgcccag
aataacggtgtcacagttgcacagctgaagcaaatgaacaagctgaaaaacgatgccatt
ttccttggccagacgcttcaggtgccggataagaagccggctgcaaagcctgcaccgaaa
cccgctgcacctaaacaaacggtctatacggttgtaaagggcgactctcttgataaaatt
gcgcggaaatataaaacaacggtatccagcctgaaaaagtggaacagcctgaagaacgat
accatcaagctcggccaaaagctgaaggtcacggcacctaaaccggcaccaaagccggct
gtgaagcctgcacccaaaccggtacagcctccaacggcaccagctgtaaattatatagtc
cagcccggtgacagcctctggctgatttcttccaaatacggcgttactacagcggatctc
atccaggcgaacaagctgaagacggaaagcatcaaagcgggacagaagcttgtgatccca
aatcctaaaaagacgcctgcagtacctgctccggctccggcgaaagctcctgccaagccg
acagaaacacaggccgtgaaaatccagcaggccatagaagaaggacataaatacttagga
gttccctatttatatggcggctccactcctgcaggctttgactgcagcggttttgcttat
tacatattcagccggacaggctttgacatcaagcgtacaagctctgcaaactatttcggc
caaggccagacggttacacagccccaggccggcgacttcattttcttctcgccaagcccc
ggctcgccaagcatcactcacatgggaatctatatcggggacggccggttcatccatgcc
gactccaccaagggaatcaccgtcacttcgacggaagtctcctatttcaaaacaaggttc
cttggctataagagattattttaa
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