Paraperibacillus marinus: V1498_21100
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Entry
V1498_21100 CDS
T11218
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf00260
Glycine, serine and threonine metabolism
pmaf00460
Cyanoamino acid metabolism
pmaf00630
Glyoxylate and dicarboxylate metabolism
pmaf00670
One carbon pool by folate
pmaf00680
Methane metabolism
pmaf01100
Metabolic pathways
pmaf01110
Biosynthesis of secondary metabolites
pmaf01120
Microbial metabolism in diverse environments
pmaf01200
Carbon metabolism
pmaf01230
Biosynthesis of amino acids
pmaf01240
Biosynthesis of cofactors
pmaf04981
Folate transport and metabolism
Module
pmaf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V1498_21100 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V1498_21100 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V1498_21100 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V1498_21100 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V1498_21100 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V1498_21100 (glyA)
Enzymes [BR:
pmaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V1498_21100 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
mCpol
Motif
Other DBs
NCBI-ProteinID:
XNZ80293
LinkDB
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Position
complement(4189958..4191199)
Genome browser
AA seq
413 aa
AA seq
DB search
MKHLATQDEKVFSAIQDELQRQRTKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRY
YGGCEHVDVVEDIARDRAKEIFGAEHANVQPHSGAQANMAVYFTILEPGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFVEYGVDENTHRIDYDTVLEKARESKPKLIVAGASAYPREIDF
KRFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGGMILCQE
EFAKKIDKSIFPGIQGGPLMHVIAAKAVSFGEVLEDSFKTYSENIIKNAKRLAEGLKKEG
LNLVSDGTDNHLLLVDVRSMNLTGKKAEHVLDEIGITVNKNTIPFDPESPFVTSGVRIGT
AAVTSRGFTESDMDEIASIIGLALKNTEDEGTLKEAKERVENLTSRFKLYEEL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacttggctacacaggacgaaaaggtatttagtgccattcaggatgaacttcaa
agacagcgtacaaaaattgaattgattgcctcagaaaactttgtaagtgaagcagtaatg
gaagctcagggatctgtgctgacgaataaatatgcagaaggctatcctggcaaacgctat
tatggaggctgtgagcacgtggatgtggtggaggatatcgcccgcgaccgtgcgaaggaa
atcttcggggccgagcatgccaatgtccagccgcactccggcgcacaggcgaatatggca
gtgtactttacgatccttgagccaggcgatacggttcttggaatgaatctctcccacggc
ggccatttgacacatggaagcccggttaacttcagcggtgttcaatataattttgtcgag
tatggtgtggatgaaaacacacaccgcatcgactatgatacagttcttgagaaagcccgc
gaaagcaagccgaagctgattgttgccggtgcgagtgcgtatccgcgcgagatcgacttc
aagcgtttccgggagatcgcagacgaagtcggtgcatacctcatggtggatatggcgcat
atcgcgggacttgtcgccgcaggactccatccaaacccggtgccgcatgcacactttgtt
acaaccactactcataaaacccttcgcggtccgcgcggcggaatgattctttgccaggaa
gagtttgcgaagaaaatagacaagtccattttccctggtatccagggcggtccgcttatg
catgttatcgctgcaaaagcagtttcctttggtgaagtgctcgaggattcgttcaagact
tactctgagaacattatcaagaatgcaaagcgtctggcagaaggtttgaaaaaggaaggc
ttgaacctagtttctgacggaacggacaatcatcttttattggtggatgtgcgttctatg
aatctaacaggcaagaaagcggagcatgttcttgatgaaatcgggatcacggtgaacaaa
aatacgattcctttcgatccggaaagtccttttgtaaccagcggagtcaggatcggtaca
gctgctgtcacttcccgcggctttacagaaagcgatatggacgagattgcttccatcatc
ggcctggcccttaagaatactgaggatgaaggaacgcttaaggaagccaaggagcgcgtg
gagaacctgacgagcagattcaagctatacgaagagctttaa
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