Providencia manganoxydans: JI723_01430
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Entry
JI723_01430 CDS
T08377
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmag
Providencia manganoxydans
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_01430 (phrB)
Enzymes [BR:
pmag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JI723_01430 (phrB)
DNA repair and recombination proteins [BR:
pmag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JI723_01430 (phrB)
Prokaryotic type
JI723_01430 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QQO62684
LinkDB
All DBs
Position
complement(323076..324521)
Genome browser
AA seq
481 aa
AA seq
DB search
MTKKRACHIVWFRNDLRVTDNKALSSACADPEANVLAVFTATPEQWRAHDLSPRQITFIH
QNLLELRHSLAQLAIPLICHTVSDFTQAAQWVLDFAQQQQADHVFFNRQYELNEQQRDQW
LINQSTSFHVHAFDDALLLPPTSVTNQKGEMYQVYTPFRRAFITQLVTTDYHSAPAPQAR
GEKLTVPAVSTLFDYDFVDIAPHFPAGEHAARQQLRQFCRLKVKNYSQHRDIPSIDGTSQ
LSPYLAIGVLSPRQCLNRLLAENPHVFDSPDSGAFTWLNELIWREFYHHLLVAFPRLCRH
QPFIEWTRYIQWNNSKEQLKAWQEGQTGYPIVDAAMRQLNTTGWMHNRLRMITASFLVKD
LLIDWRLGEQYFMQRLIDGSLAANNGGWQWSASTGTDAQPWFRIFNPTTQGKKFDPQGEF
IRQWLPELQAVPDKYIHSPHEWAESNQLKLNYPKPIVDHKQARLNTLEAFEASKRDSLKN
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaacgggcttgtcatatagtctggtttcgtaacgacttaagagttaccgat
aataaagcgttatcatctgcttgtgctgatcctgaagcaaacgtgctcgccgtgtttacc
gccacgccggaacaatggcgagcacatgatctctcaccacgacaaattacttttattcat
cagaacttacttgagttacgccattcactggcgcagttagcgatccctttaatttgccat
accgtttctgatttcacacaagcagcgcagtgggtgcttgattttgcccagcaacaacaa
gccgaccacgtgttttttaatcgccaatacgaactgaatgaacagcaacgagaccaatgg
ctaattaatcaatctacatcttttcatgttcatgcctttgatgatgcactgttgttaccc
cctacttcagtgacaaaccaaaaaggtgagatgtaccaagtctatacaccatttcgtcgc
gcttttatcacacagctcgtcacaaccgattaccactcagctcctgctcctcaggcgaga
ggagaaaaactgaccgtaccagcggtatcgaccctgttcgattatgattttgttgatatt
gcgccacattttcccgcaggtgagcatgctgcacggcagcagctaaggcaattttgtcgc
ctgaaagtaaaaaattactcacaacatcgcgatatcccatccattgatggaaccagccaa
ttatcaccctatttagctattggtgtcctatcacctaggcaatgcttaaatcgtttactg
gctgaaaaccctcatgtttttgattcgcccgatagtggcgcatttacatggctaaacgaa
ctgatttggcgtgaattttatcaccacctgctagtggcgtttccccgtttatgccgtcat
caaccgtttattgaatggacacggtacattcagtggaataactcgaaagaacaacttaaa
gcatggcaagagggtcaaacaggttacccgattgtggatgccgcaatgcgccaactcaat
accactggttggatgcataatcgactcagaatgatcaccgcgagttttcttgtcaaagac
ttattaattgattggcggcttggcgaacaatactttatgcagcggttgatcgacggctca
ttagccgccaacaatggtggctggcaatggtcggcttcaacaggtaccgatgcacaacct
tggtttcgcattttcaacccaacgacccaaggcaaaaaatttgatccacaaggtgagttt
attcgccaatggttacctgaactacaggcagtacccgataaatatattcactccccccat
gaatgggctgaatcaaatcaacttaaactgaactatccaaaaccgattgttgaccataaa
caagctcgtttgaacacgttagaagcatttgaagccagtaaacgtgacagcttgaaaaac
cattaa
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