Providencia manganoxydans: JI723_01880
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Entry
JI723_01880 CDS
T08377
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag03030
DNA replication
pmag03410
Base excision repair
pmag03420
Nucleotide excision repair
pmag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI723_01880 (polA)
03410 Base excision repair
JI723_01880 (polA)
03420 Nucleotide excision repair
JI723_01880 (polA)
03440 Homologous recombination
JI723_01880 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmag03032
]
JI723_01880 (polA)
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_01880 (polA)
Enzymes [BR:
pmag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI723_01880 (polA)
DNA replication proteins [BR:
pmag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JI723_01880 (polA)
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JI723_01880 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JI723_01880 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF2529
Prok-E2_E
HHH
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QQO62769
LinkDB
All DBs
Position
428481..431273
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPSHVAV
VFDAKGKTFRDELFESYKSHRPPMPDDLREQIAPLHEMVEAMGLPLLVVSGVEADDVIGT
LARQASQKGIPVLISTGDKDMAQLVEPNITLINTMTNTILGPQEVEDKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALALLQGIGSLEKIYNSLDDIAPLGFRGSKTLAPKMEENR
ELAFLSYQLATIKTDVELEKTCEELAVSEPNVDKLHQLFSRYEFKRWLADVESGTWMDAK
NGKSSAPTATKFEKKVEAIVAAPILNAENYQTILEQADLERWVKKLASAPLFAFDTETDS
LNTQEARLVGMSFAIEAGRAAYLPLGHDYLDAPVQLPLDDVLAAMKPILENDKILKVGQN
LKYDAEVLLNYGIELKGIEFDTMLESYVLNSVAGMGRHDMDSLAERHLNHKTVSFEEIAG
KGKKQLTFNQIALEQAANYAAEDADVTLLLHQALYPQLEAEPKLNKVFREIEMPLVPVLV
RMERTGVLIDANVLAAQSKQITARLAELEKEAFELAGEEFNLASPKQLQTILFEKLQLPI
IKKTPSGAASTNEEVLEELALDHALPKLLLEHRSLAKLKSTYTDKLPLMISPKTQRVHTS
YHQAVTATGRLSSRDPNLQNIPVRTEEGRRIRQAFIARKGYKVVAADYSQIELRIMAHLS
QDKGLLTAFAEGKDIHRATAAEVFGVPLEQVTNDQRRSAKAINFGLIYGMSAFGLARQLG
IPRGEAQRYMDLYFERYPGVLRYMENTRHQASEQGYVETLEGRRLYLTDIKSSNGMRRKA
AEREAINAPMQGTAADIIKKAMIAVDSWLRAEKPNADMLMQVHDELVFEVKESELDGVIA
KVRELMEQSMQLDVPLKVDVGIGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatagcagaaaatccccttatattggtagatggttcatcttacctgtaccgt
gcttatcatgcattcccaccactaaccaacagtgcgggtgaaccgacaggagccatgtat
ggtgtgctcaatatgttgcgtagcttgattatgcaatataagccaagccatgtggctgtc
gtctttgatgctaaaggaaaaacatttcgtgatgaattgtttgaaagctataaatcacac
cgtccaccaatgcctgatgatttacgtgaacaaatcgcaccattacatgaaatggttgag
gcgatggggctaccattattagtggtttcaggtgttgaagctgatgacgtcattggtacg
ttggcaagacaagcgagccaaaaagggatccctgttttgatcagcacgggtgataaagat
atggcacagctggtggaaccgaatatcactcttatcaataccatgaccaatactattctt
ggtcctcaagaagttgaagataagtatggtgtaccacctgagctgatcatcgactttctt
gcactgatgggcgattcatcagataacattccgggcgtaccaggggtcggtgaaaaaacg
gctctcgccttattacaagggatcggtagtttagaaaaaatctataattctttagatgat
attgctccgcttggttttaggggatctaaaaccttagcgccaaaaatggaagaaaatcgt
gaactggcctttctttcataccaacttgctaccatcaaaacagatgttgaactcgaaaaa
acctgtgaggaattagcggtatctgagcctaatgtcgataaactccatcagttatttagt
cgctacgaattcaaacgttggctcgctgatgttgaaagtggcacatggatggatgctaaa
aatggtaagagttcagcaccaacagccactaagtttgaaaagaaagtagaggcaattgtt
gcagcaccaatactcaacgctgaaaattatcaaactattttagagcaggctgatttagag
cgctgggtcaaaaaactcgcctccgcaccactgtttgcctttgataccgaaaccgacagt
ttaaacacacaagaagcgcgtttagtcggtatgtcatttgctattgaagcaggacgagcg
gcttatttacctttgggtcatgattaccttgatgcgccagtacaattgccactagacgat
gttttggctgcaatgaaaccgatattagaaaatgacaaaatattgaaggttggccaaaat
ttaaaatatgacgctgaagtgctgctcaactatggtattgagttaaaaggtatcgaattt
gacactatgctagagtcttacgtgctaaatagcgttgcaggcatggggcgtcatgatatg
gatagcttagctgagcgccatcttaaccataaaacggtatcattcgaagagatcgcaggt
aaaggtaaaaagcagctcactttcaatcaaatagcacttgagcaagcggcaaattacgcg
gcggaagatgccgacgtcaccttgctactgcaccaagcgttgtacccgcagcttgaagct
gagcctaaactgaataaagtgttccgtgaaattgaaatgccattagttcccgttctagtc
agaatggagcgcactggtgtattaattgatgcgaatgttttagcggctcaatcgaaacaa
attaccgcccgtttagctgagctcgaaaaagaagcctttgaattagcaggtgaagagttc
aacttggcttcgccaaaacaattacaaactattctttttgaaaagctgcaattacccatt
atcaaaaaaacgccaagtggagcagcctcgaccaatgaagaggtgttggaagagctagcg
ttggatcatgcgctgcctaaactactacttgagcaccgtagcttggcaaaattgaaatca
acctacactgataagctgccactaatgattagcccgaaaacccagcgggtacatacttct
tatcatcaagctgttactgcgacgggccgattatcatctcgtgatcctaacttgcaaaac
attccagtgagaacagaagaaggccgtcgtattcgccaagcatttattgcacgtaaaggc
tacaaagtggttgcggcagactattcacaaattgaattgcgtataatggctcacctatcg
caagataaagggttattaaccgcatttgcggaaggcaaagatattcaccgtgcaaccgca
gcagaagtatttggcgttccgcttgagcaagtaacaaatgatcagcgccgtagcgctaaa
gcgattaactttggcttaatttatggtatgagcgcattcggtttggcgcgtcagttaggg
atccctcgtggtgaagcgcagcgttatatggatctctattttgagcgctatccaggtgtg
ttgcgttatatggaaaacactcgccaccaagcgtcggaacaaggctatgtagagacatta
gaaggacgtcgtttgtatcttactgatattaaatcaagtaatggaatgcgccggaaggct
gctgagcgtgaagcgatcaacgcaccaatgcaaggaaccgcagcggatattatcaaaaag
gctatgatcgccgttgatagctggctgcgagcagagaaacctaatgctgatatgttaatg
caagttcatgatgaattagtatttgaagtgaaagaaagtgaattagatggggtgatcgca
aaagtgcgtgaactgatggaacaaagtatgcaacttgatgttccgttgaaagttgatgtc
ggtattggtgagaattgggatgaagctcactaa
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