Providencia manganoxydans: JI723_03140
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Entry
JI723_03140 CDS
T08377
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag00071
Fatty acid degradation
pmag00280
Valine, leucine and isoleucine degradation
pmag00310
Lysine degradation
pmag00362
Benzoate degradation
pmag00380
Tryptophan metabolism
pmag00410
beta-Alanine metabolism
pmag00640
Propanoate metabolism
pmag00650
Butanoate metabolism
pmag00907
Pinene, camphor and geraniol degradation
pmag00930
Caprolactam degradation
pmag01100
Metabolic pathways
pmag01110
Biosynthesis of secondary metabolites
pmag01120
Microbial metabolism in diverse environments
pmag01200
Carbon metabolism
pmag01212
Fatty acid metabolism
Module
pmag_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JI723_03140 (fadB)
00650 Butanoate metabolism
JI723_03140 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JI723_03140 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JI723_03140 (fadB)
00310 Lysine degradation
JI723_03140 (fadB)
00380 Tryptophan metabolism
JI723_03140 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JI723_03140 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JI723_03140 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JI723_03140 (fadB)
00930 Caprolactam degradation
JI723_03140 (fadB)
Enzymes [BR:
pmag01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JI723_03140 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JI723_03140 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JI723_03140 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JI723_03140 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQO63003
LinkDB
All DBs
Position
complement(725671..727863)
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQSETIYVQWLKTGIAELVFNSPGPINKLDTHTVASLDEAVSVLEQQSDLLGVILRSD
KPAFIVGADIKEFLSLFEAPAETLSEWLGYANHIFNRIEDLPVPTLSAINGYALGGGCEC
ILSTDLRIATPDLRVGLPETKLGIMPGFGGSVRLPRLIGLDSALEIITAGKDVGAAEALK
LGLVDAVVETEKLPQAALELIESAISGAINWQQRRQPKLQPLQLSPIEQTMSFNVAKGMV
YKVAGKHYPAPMAAVNTIEKAANCARDEALKYETASFVPLAHSDVARSLVSIFLNDQQVK
ATSKQLSRHVDAPQHAAVLGAGIMGGGIAYQSASKGIPVLMKDINEKSLDLGIDEAHKLL
NAQFERGKINASKMAKTLASIHPSLSYAGIENAQIIVEAVVENPKIKAAVLSEVEPLVSA
ETVLASNTSTIPITELAKALKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETIAKVVTY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNLLLQDGADFKEIDKVMEKEFGWPMGPAYL
LDVVGIDTAFHAEQVMALGFPERMSKTRKNAIDVMFEEKRFGQKNGKGFYQYEKDKKGKP
KKIDAPETNELLAPISSEKRSFTKEEIIARMMIPMINEVVRCLEEGIIQSPADADIALVY
GLGFPPFRGGAFRYLDTLGTAAYAKTAEAYADLSPLYQIPAGLKEKSQTNASYYAQPPVV
AIDIQKVARG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaagtgaaacgatctatgttcaatggttgaaaacaggtattgcagaactc
gtttttaactcgcctgggccaataaataagttggatactcataccgttgcttcacttgat
gaagcagtttctgttcttgaacaacaatctgatttattaggagttatcttaagatctgat
aaacccgctttcattgtaggcgctgatatcaaagagtttttatcattattcgaagcacct
gctgaaacgctaagtgagtggttaggttacgctaatcatatctttaatcgcattgaggat
ttacctgtacctactcttagtgccattaatggctatgcgctaggtggtggttgtgagtgc
atcctttctactgaccttcgtattgcgacaccagatctacgggtaggcctacccgaaacg
aaattagggattatgcctggctttggtggctctgttcgccttcctcgattaatcggttta
gatagtgctcttgagattattactgcgggtaaagatgtaggtgccgctgaagcattaaaa
ttaggtttagtagatgcggtcgttgaaactgaaaaattaccacaagcggcgcttgaactg
attgaatccgcaatttcaggagccattaactggcaacaaaggcgtcaacctaagttacaa
ccattgcagcttagccctatcgaacaaacaatgagcttcaatgttgctaaaggtatggtt
tacaaagtggcaggtaaacactatccagcaccgatggctgcggttaacacaattgaaaaa
gccgcaaactgcgccagagatgaagctttaaaatatgaaaccgctagctttgttcctctc
gcacatagcgatgtcgcccgttctttagttagcatttttcttaatgaccaacaagttaaa
gcgacaagtaaacaactttctcgccatgttgatgcacctcagcatgctgccgttcttggc
gcagggataatgggtggtgggatagcttaccaatccgcaagtaaaggcatccctgttcta
atgaaagacatcaatgaaaaatcgttagatttaggtattgatgaagcccataaattatta
aatgcacagtttgaaagaggaaaaataaacgcctctaaaatggcaaaaacccttgcctct
atccacccttcactttcatatgcaggcattgaaaacgcacagattattgtagaagcagtt
gtagaaaatccgaaaattaaagcggcggtcttatctgaggttgaacctttagtcagcgct
gaaactgtattagcctctaatacatctacaattcctatcactgaattagccaaggcacta
aaacgacctgaaaatttttgtgggatgcacttctttaacccagttcatcgcatgccatta
gttgaaattattcgtggcgagaaaacatccgatgagacaatagcgaaggtcgttacctat
gccagcaaaatgggtaaaacaccgatagttgtcaatgactgcccaggcttttttgttaat
agagtcctgtttccttactttgcaggtttcaacttattactccaagacggcgctgacttt
aaagaaatcgataaagttatggagaaagaattcggatggccaatgggtcctgcatatctg
cttgatgtcgttggtattgataccgctttccatgctgaacaagtcatggcattaggtttc
cctgaacgtatgagtaaaacacgcaaaaatgccattgatgtcatgtttgaagaaaaacgc
tttggtcagaaaaatggcaaaggtttttatcaatacgaaaaagataaaaaaggtaaacca
aagaaaattgatgctcccgagacaaatgagcttttagcaccaatcagtagtgagaaaagg
tcatttacaaaagaagagatcattgcccgtatgatgatccctatgattaacgaagttgtt
cgttgcttagaagaaggcattattcaaagccctgctgatgcagatattgctttagtttat
ggtcttggcttccctcctttccgtggaggtgcgttccgctatttagatactcttggcacg
gcagcttacgctaaaacagcggaagcttacgctgatttaagtcccttgtatcaaattcct
gcgggtcttaaagaaaagtcgcagaccaatgcgagttattatgcacaacctcctgttgtg
gcaatcgatattcaaaaagttgcgagaggctaa
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