Providencia manganoxydans: JI723_03785
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Entry
JI723_03785 CDS
T08377
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pmag
Providencia manganoxydans
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_03785
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JI723_03785
Archaeal homologous recombinant proteins
JI723_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
cobW
ABC_tran
SMC_N
NTPase_1
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QQO63120
LinkDB
All DBs
Position
complement(878984..882661)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKILSLRFKNINSLKGEWKIDFNQEPFISQGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNTLSASQNELMTRHTGECLAEVEFEVKGTAYRAFWSQRRASNKPDGKLQSPKAELATVN
DGKIIAEKISEVREQIIQITGLDFGRFTKSILLSQGDFAAFLNASEKERADLLEEITGTE
IYSQISSYIYRQHKHVKNDLEILKARAQSIHLLTEDEYQTLLTEQQRLAEKEIELNQKRT
QNQQILHWQQRQQQLNIRLQQQQLELQQAQSAYQLAEPELKKLTDNIPAEHLRPLWQDVE
RQQQSLNELLEKQQNLLLALNTQTQQLAPLQEQLTQVNTQNTQHLSYVQQQTLVIDNQVR
PLDNEIINLNQQIKEILEQQNQYQSQHQTKQTVIERAQQQITLSNTELSTIQHYLQENQQ
DALISQHIASWRQQEQYLEQSKKQVTQLEQKQQTLKQQYATSCNEQKQQTEQYAQLQQQV
EQDSAIYQQIEKKYLAWLETHDLEKISQSVEQLRITAQHLQLLPVLLTQWQELQNQQQIK
LTQQKEITQSITQVEKQCQQIETQISHTQPHLTDLQARLRLEQKIVSLETERQQLIAGNP
CPLCGATEHPAVTEYQAIEPSQTEQRLHELTTQFEQLKHTLVTQQTQLQKDIQRQEDNQQ
ALLQLANQESHIQKQWVTTCQKAMIDDLAIEQSAVEQLLNQSQQQLSRQQQLLEDFTLLE
REYQQSKHQLHEKQSLNKQQQSTLTLLDERIQHIQRSIDETQTQLVTQQQRYNEQHQQLQ
SSLSAFQLPANEHISQWFDGLEKRGQLYEVKKQAIQDLTKKIAVTEAMLQAEVAQQATVK
QQLENSQQQLQQLQLLLQQKQHSRQSLLGGQSISQFVSQLRVEQEKITAQLQQLNEQVTY
REKEIASLKGSYREVSSAIEKGQQQQSSAQEHFNQALINSPFATQQTFLEALLSAEEKLR
LEQLHQQLKQSCIQAETRYKEGELALQEHLAQQPKEMLNTQQAQLQHDINELDSAIKNLN
QQQGQIISQLNTDKQQRHQQRGLLQEIEQSQAHCDDWGLLNELIGSAEGDKFRRYAQGLT
FDCLISLANQRLDKLHGRYILKRSHNSDLELQVIDVWQADTIRDIKTLSGGESFLVSLAL
ALALSDMVSNKTQLESLFLDEGFGTLDPETLDIALDALESLNASGKTIGVISHVEAMKER
IPVQIPVKKTNGFGFSELPSQYRVN
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgagtttacgttttaaaaatattaactccctcaaaggtgaatggaaaatt
gactttaaccaagaaccttttatcagccaaggcctattcgccattactggccctaccgga
gctggtaaaacaacactgttagatgcgatttgtcttgctctttatcatcaaactccgcgt
ttaaataccttatcagccagccaaaatgaactcatgacccgtcacacaggcgaatgtctt
gcggaagttgagtttgaagtgaaaggaacagcctaccgcgctttttggagccaaagacgc
gcaagtaataagcctgatggtaaattacagtcaccgaaggccgagttagccacggtgaat
gatggcaaaattatcgctgagaaaatcagtgaagtcagagagcaaattattcaaattact
gggctcgattttggccgtttcactaaatcaatccttctatctcaaggtgattttgcagcc
tttttgaatgccagtgaaaaagaacgagctgatttacttgaggaaatcactggcaccgaa
atttatagccaaatctcgagttacatttatcgtcagcacaaacacgttaaaaatgattta
gaaattttaaaagctcgtgcacaaagtattcacttactcacagaagatgaatatcaaaca
ttactcactgaacaacaacgtttggctgaaaaagaaatagagttaaatcaaaagcgtaca
caaaatcagcaaatactacattggcagcaacgccaacagcaactcaatatacgtttacaa
cagcagcaattagagctgcaacaagctcaaagtgcctatcaattagctgaacctgaacta
aaaaaactcactgataacatccctgctgagcacctacgccctctatggcaagatgtagag
cgccaacaacaatcactaaatgaattattagaaaaacagcaaaatcttttactggctcta
aatactcagactcaacagctagctccattacaagaacaattaacacaagttaatacgcaa
aatacgcagcacctaagctacgtccagcaacaaacgttagtgatcgataaccaagttcgc
ccattagataacgaaattattaatttaaatcagcaaattaaagaaatactagagcaacaa
aatcaatatcaatcccaacatcaaacaaaacaaaccgtaattgaacgtgctcaacagcaa
ataacactgtcaaatacagaactcagcactattcagcattatttgcaagaaaaccaacaa
gatgcactaatttcgcaacatattgcttcatggcgtcaacaggagcaatatcttgaacaa
tctaaaaaacaagttacccagcttgaacagaaacagcagacactaaaacaacaatatgca
acgtcatgcaatgaacaaaagcaacaaaccgaacaatatgcgcaacttcaacaacaagtt
gagcaagatagtgctatttaccagcaaattgaaaaaaaatatttagcatggctggaaact
catgatcttgaaaaaattagccaatctgttgagcaattgcgcataacagcacagcatcta
caattgttacccgttctgcttactcaatggcaagagctgcaaaatcagcagcaaattaaa
ttaactcaacaaaaagagattacccaatcaatcacacaagttgaaaaacagtgccaacag
atagaaacacaaattagccatactcagccacatttaaccgatttacaggctcgattacga
ttagaacaaaaaatagtcagcttagaaacagaacgccaacagctgatcgcaggtaaccct
tgcccactttgtggagcaactgaacaccctgcggtaaccgaatatcaagccattgagccg
agccaaacagaacaacgtttacatgaactaacaacgcaatttgagcaactcaaacacacc
ttagtcactcaacaaacacaattgcaaaaggatattcaacggcaagaggacaaccagcaa
gcactattacaacttgccaatcaagaaagtcacatacaaaaacagtgggtaacaacctgt
cagaaagcaatgattgatgatttagcgattgagcaaagcgccgtagagcagctgctcaat
caaagccagcaacagctctctcgccaacaacagctcttggaggatttcacgttactagaa
cgtgaatatcagcaatcaaagcatcagttgcatgaaaaacaatcattaaataagcagcaa
caatcaacgttaactttacttgatgagcgcatacagcacattcaacgctcaatcgatgaa
acccaaacgcagctagtgactcagcaacaacgatataatgaacaacatcaacaactgcaa
tcgtcattatcagcctttcaattaccggctaatgaacacatttctcagtggtttgatgga
ctagaaaaacgcggtcagttatatgaagtcaaaaaacaggccatccaagatctcaccaaa
aaaattgccgtcacagaggctatgttacaggccgaagtcgctcaacaagctacggtgaaa
caacaattagaaaatagccaacagcagttacaacaactgcaactgttactgcaacaaaag
cagcactcgcgacaatcattgctgggaggtcaatccatctcacaatttgtcagccaatta
cgcgtagaacaagagaagatcactgctcagctacaacagctcaacgagcaagtgacttat
cgtgaaaaagaaatcgcatcactaaaagggagctatcgtgaagttagcagtgcgattgag
aagggtcagcagcaacagagcagcgcccaagaacattttaatcaagcactgataaacagc
ccttttgcgacacagcagacatttttggaagcgttattatcagctgaagaaaaattgcga
ttagaacaattacatcaacaattaaagcaatcctgcatacaagcagaaacacgttataaa
gaaggtgagttagcattacaagagcatttggcacaacagccaaaagagatgttaaatacc
cagcaagcacaattgcagcatgatattaatgaacttgatagtgcaataaaaaatctcaat
cagcagcaagggcaaattatcagtcagctaaatactgataagcagcaacgccaccaacag
cgtggcctattacaggaaatagaacaaagccaagcgcattgtgatgattggggactactc
aatgaattaattggctctgccgagggagataaattccgtcgctatgcacaaggcttaacc
tttgattgtcttatttcgctcgccaatcagcggctcgataagctacatgggcgttatatc
ttaaaacggagccataattctgatcttgaattacaagtgattgatgtctggcaagccgat
accatcagggatatcaaaaccctttccggaggcgaaagtttcttggtcagcctcgcattg
gcattggcgttatcagatatggtgagcaataaaacgcagttggaatcattattccttgat
gaaggatttgggacgctcgatccagaaaccttggatatcgccttagatgctttagaaagt
ctaaatgcctcaggtaaaaccattggggtcattagccatgttgaggcaatgaaagaacgg
atacctgtgcagatccccgtgaaaaaaaccaatggttttggatttagtgaattacctagc
caatatcgagttaactaa
DBGET
integrated database retrieval system
