Providencia manganoxydans: JI723_03790
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Entry
JI723_03790 CDS
T08377
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmag
Providencia manganoxydans
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_03790 (sbcD)
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JI723_03790 (sbcD)
Archaeal homologous recombinant proteins
JI723_03790 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QQO63121
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All DBs
Position
complement(882658..883878)
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AA seq
406 aa
AA seq
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MRIIHTSDWHLGQYFFTKSRAAEHQYFLTWLIEQVKQYQVDAVIVAGDIFDTGSPPSYAR
ELYNQFVVSLQQTGCQLVILSGNHDSVSVLNETSSLLAYLNTDVVTSGSQPHVITLKNAQ
GEPGALLCAIPFLRPRDIQLSVAGQSSEQKQLSLQNAISEYYQCSYQLAQQQREALGLEI
PIIATGHLTVVGAEVSDSVRDIYIGTLDAFPSGAFPPADYIALGHIHRPQVIGGKPHIRY
CGSPIALSFDEAEQQKSVCLVEFDRSDIAQIQQLPIPIFQPLKTLKGSLADIQKQLNEID
NNDNIQPIWLDIEVASQDYLADIQQRIEALVKDLPVDVVLLRRARKQPQGQQTALANETL
NELTAEEVFLRRLTEEELGDKEKEQRLLLLFKQSHDALRSELEGDA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcatccatacctctgactggcaccttggccaatatttttttacaaaaagccgt
gctgcggaacaccaatatttcttaacttggctaatcgaacaagttaaacaatatcaggtt
gatgctgtcattgttgccggtgatatctttgatacgggctcaccgcccagctatgcaaga
gaactttacaaccaatttgtcgtctctttacaacaaactggctgccaattggtgatactc
agcggtaatcatgattctgtttctgtgttaaatgaaaccagttcactactggcttattta
aatactgatgttgtcacctcgggtagtcaaccccatgtcatcacacttaaaaatgcacaa
ggtgagccaggggcattgctatgcgctatcccatttctgcgcccaagggatattcaactc
agcgttgcagggcaaagtagcgaacaaaaacagctctcactacaaaatgcaattagtgaa
tattatcagtgtagctatcaactagcccagcaacaacgtgaagctttggggcttgaaatt
ccgattattgccacaggtcatctaaccgttgttggtgccgaagtttctgattctgtgcgg
gatatttatatcggcaccctagatgcctttccatcaggagcctttccccctgccgactat
attgcattggggcatatccatcgtccacaagtcatcggcggaaaaccgcacattcgctat
tgcgggtcacctattgcattaagttttgatgaagctgaacaacaaaaaagcgtttgttta
gtggagttcgatcgcagtgatatcgctcaaattcaacaattaccgatccctatatttcag
ccattaaaaaccctcaaaggatcacttgccgatatccaaaagcagctaaatgaaatagat
aataatgacaatattcaacccatttggctggatatcgaggttgccagccaagactacctt
gctgatatacagcaacgtattgaagcattggttaaagatttacctgttgacgtggttttg
ttacgtcgagctcgcaagcagccacaaggccaacagacagctctcgccaatgaaacatta
aatgagcttaccgccgaagaggtgtttttacgtcgcttaacagaagaagaactgggcgat
aaagaaaaagaacaacggctcttactgctatttaaacaatctcacgatgcattacgttct
gagcttgagggggacgcatga
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