Providencia manganoxydans: JI723_05420
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Entry
JI723_05420 CDS
T08377
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI723_05420 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmag03019
]
JI723_05420 (pcnB)
Enzymes [BR:
pmag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JI723_05420 (pcnB)
Messenger RNA biogenesis [BR:
pmag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JI723_05420 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QQO64244
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All DBs
Position
complement(1237052..1238623)
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AA seq
523 aa
AA seq
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MFVTISRCTIFNRVANFCRNILSRNDKDTRDAQAAGERPVTYSDTAETKPVEQNAKQTKP
TVRHSKRADVQAEKQHTMTTVIDENITIIPRSGHTISRSDISDNALKVLYRLHKSGFDAY
LVGGGVRDLLLGKKPKDFDITTNATPEQIRKLFRNCRLVGRRFRLAHIMFGPEVIEVATF
RGHHDQNESDDKNLSQQAQNGMLLRDNIFGSIEDDAIRRDFTVNSLYYNIDDFSVRDYVG
GLKDLKEGIIRLIGDPETRYREDPVRMLRAVRFACKLDMRIEPNTAQPIQRLAPLLKEIP
SARLFEESLKLLQAGKGYATYNMLKEYHLFEQLFPVVSSRFTTNNDSPMEKIIDQVLKNT
DFRIKNDKRVNPAFLFAVMLWYPVTEHAEKLSQEGGLAYYDAFALAMNDVLDEQCRSIAI
PKRITTTMRDIWQLQLRLPRRQGRRANKLMEHPKFRAAFDLLELRANVERRNELQELAIW
WDDYQRSNNTKQREMIAELGSAPVRKRHRPRKPSNGSRKSNTL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atattcgtaacgatatcgaggtgtactatttttaaccgagtagcaaatttctgccgcaat
attttatcgcgaaatgacaaggatacgcgtgacgcacaggcagccggtgaaaggccagtc
acttattctgacacggcggaaactaagcccgtggagcagaacgctaaacaaacaaaacct
acggttcgtcattccaagcgtgccgatgttcaggcagagaagcaacacacaatgacgact
gtaattgatgaaaacatcaccatcatcccgcgttcagggcatactatttcacgtagtgat
attagtgataatgcactaaaggtactttatcgcctccacaaaagtggttttgatgcctat
ttagttggcggcggtgtgcgtgatctccttcttggtaaaaaacctaaagattttgatatc
accactaacgcaaccccagagcagatccgcaaactgtttcgtaactgccgcctagttggc
cgtcgtttccgtcttgctcatattatgtttggacctgaagtgattgaagttgcgaccttc
cgtggccatcatgaccaaaatgagtcagacgacaaaaacttatcgcaacaagcacaaaat
ggcatgttactgcgcgataatattttcgggtcaattgaagatgatgccattcgtcgcgat
tttactgttaatagcctctattacaacattgatgacttctctgttcgtgactatgttggc
ggtttaaaagatctcaaagaaggcattatccgtctgattggtgatcctgaaacacgctac
cgcgaagatccagtaaggatgctacgcgcagtacgttttgcttgtaagctagatatgcgt
atcgagccaaatacggcacagccaattcaacgacttgccccattgttaaaagagatccct
tctgcgcgtttatttgaggagtccttaaaactactacaagcaggcaaaggctatgcgacc
tataacatgctgaaagagtatcatctgtttgagcaattatttcctgtggttagtagccgt
tttacgacgaacaatgattcaccaatggaaaaaattatcgatcaggtacttaaaaatact
gactttaggattaaaaatgacaagcgggttaaccctgcgtttttatttgccgttatgtta
tggtatccggtcactgagcatgctgaaaagctgtctcaagaaggcggtttagcgtattac
gatgcatttgcactagcaatgaatgatgtgcttgatgaacaatgccgctcaattgctata
ccaaaacgcattacaaccactatgcgcgatatttggcagctacaactacgtcttccacgt
cgtcagggccgccgtgcaaataaattgatggagcatcctaagttccgtgctgcttttgat
ttattagaactaagagcaaatgtagaacgtagaaacgagctccaagaactggcgatttgg
tgggatgattaccaacgttctaataacactaagcagcgtgaaatgatcgccgagctggga
agtgcacctgttcgtaaacgtcaccgcccacgtaagccttcaaatggttcgcgtaaatcg
aatacgctctaa
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