Providencia manganoxydans: JI723_08555
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Entry
JI723_08555 CDS
T08377
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pmag
Providencia manganoxydans
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_08555
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
JI723_08555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
zf-tcix
SLFN-g3_helicase
AAA_22
AAA_30
Zn_ribbon_3
Zn_Ribbon_1
T1R_D3-like
AAA_16
AAA
SNF2-rel_dom
Zot
Motif
Other DBs
NCBI-ProteinID:
QQO63987
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All DBs
Position
complement(1936265..1938025)
Genome browser
AA seq
586 aa
AA seq
DB search
MPFQLRPYQQEAVDSTIRYFRQHRDPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYLAYGLEADIFAAGLNRKESHNKVVFGSVQSVARNLDNFNDNFSLVIIDECH
RISVNEKSQYQQVINRLSQYNSTLKVLGLTATPYRLGSGWIYQYHYHGMVKGDDSCFFRE
CIYELPLHYMIKNHFLVPPERLDMPVLQYDFSQVSLSSSGIFNQHELNLSIKKQKRITPT
IVAQIVEYALPRQGCMIFAATVEHAKEILGYLPQETAALVTADTPAAEREAIIQQFKNKQ
LHFLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLSPNKHECLILDYAGNP
HDLFRPEVGSSKPNSSSVPVQVFCPLCQFANTFWGKCTEDGHIIEHYGRRCQGWEENERG
EKQQCEFRFRFKQCPHCGAENDIAARRCQKCDEVLSDPDDMLKAALKLKDALIIRCGGMA
LTTGTDNKGEWLKISYYDEDGTSVSERFRLHTPAQRRAFEHHFLREHLRAPGVPFKWTTA
NDIITQQVVLRYPQFIVARKKESYWEIRQKIFDYQGRFRVADQLYS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccaacttcgtccataccaacaagaagctgtcgattcaacaatacgctatttt
cgtcagcatcgtgatcctgcggttattgtccttcccactggtgcgggaaaaagtttagtc
atcgctgaacttgcacgactagcacgaggtcgtgtgctggttttagctcacgtcaaagaa
cttgttgagcaaaatcatgctaagtaccttgcctatggccttgaagccgatatttttgct
gctgggttaaatcgtaaagagtcacacaataaagttgtctttggcagtgtacaatctgtt
gctcgtaatcttgataactttaatgataacttttcactggtcatcattgatgaatgtcat
cgtattagcgtgaatgaaaaaagccaatatcaacaagttatcaatcgattaagtcaatac
aattcaaccttaaaagtacttggtttaacggcaacaccctatcgcctcggatcaggttgg
atataccaataccattatcatggaatggttaaaggcgatgactcatgcttttttcgtgag
tgtatttatgagttaccattacattacatgatcaaaaatcattttttagttcctcctgag
cgtcttgacatgccagttctacagtatgattttagccaagtgtcactcagttcatccggt
atttttaatcagcatgaattaaacctatcaattaaaaaacaaaaacgtattaccccaaca
attgtcgcgcaaattgttgagtatgctttaccgcgccaaggttgcatgattttcgccgca
acagttgaacatgcgaaggaaattttaggttatttgcctcaagaaacagccgctttagtc
acggcagatacccctgctgctgaacgtgaagcgattattcagcaatttaaaaataaacaa
ttgcactttttagttaacgtttctgtgcttaccactggttttgatgcgccgcatgtcgat
gtgatcgctattttacgtccaactgaatccgtcagtttatatcaacagattgttggtcga
gggctacgcctttcgcctaataaacatgaatgtttgattttagattatgcaggcaatcca
catgatttgtttcgccctgaagtcggctccagcaaaccaaattcgagtagtgtccccgtt
caggttttttgtcctctttgtcaatttgccaatactttctggggtaaatgcactgaagat
ggtcatatcattgagcactatggccgtcgatgccaaggctgggaggaaaacgaacgtggc
gaaaaacaacaatgtgagtttcgttttcgttttaaacaatgtccacattgcggtgcagaa
aatgatatcgccgcacgtcgctgccaaaaatgtgatgaagtgttatccgatcctgatgat
atgttgaaggcagcattaaaactcaaagatgcattaatcatacgctgtggtggcatggca
ctaacaactgggactgataataaaggtgaatggttgaaaattagctattatgatgaagat
ggtacctctgtttcagaacgttttcgcttacatactccagcccaacgacgtgcttttgaa
caccattttttacgtgaacacttgcgagcccccggtgttccgtttaaatggacaacagct
aatgacatcattacgcaacaagttgtattacgttacccacaatttattgtcgcaagaaaa
aaagagagctattgggagatccgtcaaaaaatattcgattatcaagggcgctttcgcgtc
gctgaccaactctattcgtaa
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