Providencia manganoxydans: JI723_09655
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Entry
JI723_09655 CDS
T08377
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JI723_09655 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_09655 (xthA)
Enzymes [BR:
pmag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JI723_09655 (xthA)
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JI723_09655 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QQO60593
UniProt:
A0ABX7A943
LinkDB
All DBs
Position
complement(2176154..2176975)
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AA seq
273 aa
AA seq
DB search
MKFISFNINGLRARPHQLAAIIDKHQPEVIGLQETKVHDDMFPYDEVSKLGYHVFYHGQK
AHYGVALLTKNQPVAVRKGFPTDEEDAQRRIIMADIETSNGLLTVVNGYFPQGESRDHPI
KFPAKQKFYQDLQNYITSTQTPDSQLLIMGDMNISPSDLDIGIGEVNRKRWLKTGKCSFL
PEEREWMDRLLNWGLVDTYRTMNPEVDDCYSWFDYRSKGFDDNRGLRIDLLLASAALSQH
CIGTGIDYDIRGMEKPSDHAPVWAEFDLTKTAP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatctcgttcaatattaatggcctacgtgctcgtccacatcagttggctgct
atcattgataaacatcagccagaagtgattggtcttcaggaaaccaaggttcatgatgac
atgtttccttacgatgaggtgagtaaactcggctatcatgtcttttatcacggtcaaaaa
gcacactatggggttgcactattaactaaaaatcaacccgttgcagttcgtaaaggtttt
cctactgatgaggaagatgcccaacgtcgaattattatggctgatatcgaaaccagtaat
ggtttactcaccgtcgtcaatggctacttccctcaaggtgaaagccgtgaccatccaata
aaatttccagctaaacaaaagttttatcaagatctacaaaactacataacctcaactcaa
acacctgattcgcaactactgatcatgggcgatatgaatattagcccaagtgatcttgat
atcggtattggtgaggttaaccgtaaacgctggttaaaaacggggaaatgttcgttttta
cctgaggaacgcgagtggatggataggctactcaactggggattagtcgatacctatcgc
acgatgaatccagaggttgatgattgctattcatggtttgattatcgttctaaagggttt
gatgataaccgtggcctacgcatagacttgctattagcctcagcggcactgtcgcaacat
tgcattggcacaggtatagattatgacattcgtggaatggaaaaaccttcagatcacgcc
cctgtctgggctgaatttgatttaaccaaaactgctccctaa
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