Providencia manganoxydans: JI723_13660
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Entry
JI723_13660 CDS
T08377
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pmag
Providencia manganoxydans
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmag01002
]
JI723_13660 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmag01011
]
JI723_13660 (ldtD)
Peptidases and inhibitors [BR:
pmag01002
]
Cysteine peptidases
Family C82
JI723_13660 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmag01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JI723_13660 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PilW
Motif
Other DBs
NCBI-ProteinID:
QQO61314
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All DBs
Position
complement(3041554..3043284)
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AA seq
576 aa
AA seq
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MANKRAKALRISVICGLLSMQFPVLSAQEVGIGHVQTEEVVQQNVIATPEMTISPSESLA
QITAALPVGVKPVFSSQLSKIYADQQMKLLWQDETAIEQFQQQLAELALSGVQPQFSEWL
LSLENAQLSELGRDVILSDAMLGYLQYLSGVSANGQFWLYRKQPYKLVAPTATQIKPWLD
AVSEHRLSEWIKAQAPQNELYQPMRKEMLKQLNMNDDGLELVDTKTLKPGQSSDDVITLR
EILYRQGLLDEAAVGEALDASATEAEIAAATAKARLYSDELVEAVKKFQLQYGLEADGMV
GKGTKVWLNMKPQQKAGLMALNIQRLRIIPDSNGTGILVNIPGFSLNFYLNDEIILDSKV
IVGRPDRKTPIMSSALNNVVINPPWSVPTSMARKDIAPKGKQDPSYFSRKGYTVYSGWGQ
DSFEIDPYSIDWEQISPANFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNR
SARAISSGCVRVNKANELASILLGDAGWEQKRIDGAIKEGSTKYVNIPDRIPVYLYYQTA
WVDKDQQPQYRADIYQYDNSINNAEEYLPAIKNILH
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaagggcgaaagctctgcgaatttcagtaatctgtggattgttgtcaatg
caatttcctgttctttctgcacaagaggttggtattggtcacgtgcaaacagaggaagta
gtacagcaaaatgttattgcaacacctgaaatgacaatcagtcctagtgaaagcttagct
caaattacagcagcactgcccgtaggagttaaacctgtcttttcgtcacagttatccaaa
atttatgctgatcaacaaatgaaattattatggcaagatgaaacggccattgaacaattt
cagcagcagttagcagagttagcactttctggagttcagcctcaatttagtgaatggtta
ttgagccttgaaaatgctcaactgagtgaactaggacgagatgttattctttcggatgcc
atgttagggtatttacaatacctttcaggtgtttcagccaatgggcaattttggctatat
cgcaaacaaccttataaattagtcgcgccaacggcaacacaaataaaaccatggctagac
gctgtttctgaacaccgcctgagtgaatggattaaagctcaagctccacaaaatgagctg
tatcagccgatgcgtaaggagatgttgaagcagcttaatatgaatgatgatggtttagag
ctagtcgatactaagacgctaaaacctggccagtccagtgacgatgtgattacgttgcgt
gaaattttgtatcgacaaggtttactcgatgaagctgcggttggtgaggcattagatgct
tcagcaacggaagctgaaatagcggcagcaacagcaaaagcccgtttatacagtgatgag
ctggttgaagctgttaagaaattccaactgcaatatggcttagaagcggatggaatggtg
ggtaaagggacaaaagtttggctaaatatgaagcctcagcaaaaagctgggttaatggcg
ctaaatattcaacgcttacgtattattcctgacagtaatggaactgggattttagtgaat
attcccggtttttcattaaatttttatctcaacgatgagatcattttagattcaaaagtg
attgttgggcgccctgatcgcaaaacgcctattatgagcagtgcattaaataatgttgtg
attaacccgccatggagcgtaccaactagcatggctcgtaaggatattgcgccgaaaggt
aagcaagacccgagttactttagtcgcaaaggatatacggtttattcgggttggggtcag
gactcttttgaaattgatccatattcgattgattgggaacaaatttctcctgccaacttc
ccttatcgtattcgccaagctccaggtcccacaaactctttaggccgctataagtttaat
atgccgagttctgatgcgatttatttacatgatacgccgaaccacagtttgtttaaccgc
agtgcaagggcaattagctccggctgtgtgcgggtgaataaagcaaatgaacttgcgtcg
attttattaggggatgcggggtgggagcaaaagcgtattgatggcgcaattaaagagggc
tcaacaaagtatgtcaatataccggataggatccctgtttatctgtattatcaaaccgca
tgggtcgataaagatcaacagccacagtaccgagcagatatttatcaatatgacaacagc
attaataatgcagaggaatatttaccagcgataaaaaatattctgcattag
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