Providencia manganoxydans: JI723_16855
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Entry
JI723_16855 CDS
T08377
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmag
Providencia manganoxydans
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmag03021
]
JI723_16855 (rpoH)
Transcription machinery [BR:
pmag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JI723_16855 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_10
KORA
HTH_3
IF2_N
UCR_14kD
SANT_DAMP1_like
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QQO61890
LinkDB
All DBs
Position
complement(3711251..3712129)
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AA seq
292 aa
AA seq
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MTKDMQSLALVPQGSIEAYMRAANAYPMLTAEEEKELAERLHYHGDLDAAKQLILSHLRF
VIHVARSYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKSQRKLFFNLRKNKKRLGWFNQDEVDMVAKELGVSTKDVREMESRMSAQDM
AFDMSDDDDSGDFGQPVAPVLYLQDKSSDFAGSIEEDNWESHATDRLADALDSLDERSQD
IIRARWLDDDNKTTLQELADKYGVSAERVRQLEKNAMKKLRAAMEDDEEDEY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagacatgcaatcattagcacttgttccgcaaggaagtattgaagcctatatg
cgggcggctaatgcttatcctatgctcaccgctgaggaagaaaaggaacttgctgaacgg
ctgcattaccatggtgatctggatgcggcaaaacaattgatcctatcgcacctgcgtttt
gtgatccatgtggctcgtagctacgcaggctatggtttaccgcaggcagatctcattcaa
gaaggaaatattggcctgatgaaggccgttcgtcgctttaatccagaagttggcgttcgc
ttagtttctttcgctgttcattggatcaaagctgaaattcatgaatacgtcttacgtaat
tggcgtattgttaaagttgcaaccactaaatcacaacgtaagctgttttttaacttaaga
aaaaacaaaaaacgtcttggttggtttaatcaagatgaagtagatatggtggcaaaagag
ctgggtgttagcacaaaagatgtccgtgaaatggaatcccgtatgtctgcgcaagacatg
gcatttgatatgtcagacgatgatgacagcggtgattttggtcagcctgttgcgcctgtg
ctgtacttgcaagataagtcgtcggattttgcaggttctatcgaagaagataactgggaa
agccatgcgacagatcgccttgcagatgctttagattcattagacgaacgtagccaagac
atcattcgcgcgcgttggttggatgatgataataaaacgacgttacaagaactggctgac
aaatatggtgtttctgctgaacgtgtccgccagctggaaaaaaacgcaatgaaaaaattg
cgtgctgctatggaagatgacgaagaagacgaatactaa
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