Providencia manganoxydans: JI723_18610
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Entry
JI723_18610 CDS
T08377
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag00300
Lysine biosynthesis
pmag00470
D-Amino acid metabolism
pmag01100
Metabolic pathways
pmag01110
Biosynthesis of secondary metabolites
pmag01120
Microbial metabolism in diverse environments
pmag01230
Biosynthesis of amino acids
Module
pmag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JI723_18610 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JI723_18610 (dapF)
Enzymes [BR:
pmag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JI723_18610 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QQO62212
UniProt:
A0ABX7ADZ6
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All DBs
Position
complement(4090352..4091176)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDGVTQNVYFSPELISRLADRHTGVGFDQLLLVEAPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKQKIKVSTQAGRMVLTVNDNDDVCVNMGE
PEFEPQKVPFRAIKAEKTYIIRALERTVLCGVVSMGNPHCVIQVESVHTAEVEILGPVLE
SHERFPERVNVGFMEVVSANHIRLRVYERGAGETQACGSGACAAVAIGIQQGVLASRVKV
DLPGGSLDISWEGPGTPLYMTGPTSHVYDGVLQL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctaaaatgcatggcttaggtaatgattttatggtggtagatggcgttaca
caaaacgtctatttttcgcctgaattaatcagccgtctcgcggataggcatacaggtgtt
ggtttcgaccaattgttattggttgaagcgccttatgatcccgacttagatttccattat
cgtatctttaatgcagatggtagcgaagttgctcaatgtggcaatggtgctcgttgtttt
gctcgttttgtacgtcttaaagggctcaccaataaacaaaaaattaaagtgagtactcaa
gcgggccgtatggttcttactgtgaatgataacgatgacgtgtgtgtcaacatgggagaa
cctgaatttgagccacagaaagtgccatttcgtgccattaaagcggaaaaaacttatatt
attcgtgcgctagaacgtacagtgttatgtggtgttgtttcaatgggaaatccccactgt
gtgatccaagttgaaagtgtgcacaccgcagaagtcgaaatattagggccggtattggaa
agccatgagcgcttccctgagcgggtcaatgttggttttatggaagtagtcagtgcgaac
cacatccgtttacgtgtttatgaacgtggcgccggtgaaacgcaggcatgtggtagtggc
gcttgtgccgcggttgcgattggtattcagcaaggggtgttggcaagtcgggttaaagtt
gatttaccggggggctcactcgatatcagttgggaaggaccgggtacaccgttgtatatg
actgggccaactagccatgtctatgatggagttttacagctttag
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