Providencia manganoxydans: JI723_18745
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Entry
JI723_18745 CDS
T08377
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI723_18745 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmag03019
]
JI723_18745 (rhlB)
Enzymes [BR:
pmag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JI723_18745 (rhlB)
Messenger RNA biogenesis [BR:
pmag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JI723_18745 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQO62235
UniProt:
A0ABX7AEP6
LinkDB
All DBs
Position
4120186..4121472
Genome browser
AA seq
428 aa
AA seq
DB search
MSKAHLTEKKFSDFALHPKVIEALNKKGFNFCTPIQASTLPFTVEGKDVAGQAQTGTGKT
LAFLTSTFHYLLTHPAIEGKKANQPRALLMAPTRELAVQIYSDAKELAEYTGLKMGLAYG
GDGYDEQLKVLQNGVDILIGTTGRLIDYAKQGHVDLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAVTERLNLLFSATLSYRVRELAFEQMNNPEYIEVEPLQRTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVAQKKRLRILE
EFTQGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGNSISLA
CEEYALNLPAIEEYIQHSIPVSKYNSEALLTDLPAPKRRHRPRPGGPRRNSNSPRRHNGP
RNNHKRSG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcacacttgacagaaaagaagttttccgacttcgccttgcacccaaaagtc
attgaagcacttaataaaaaaggcttcaatttttgtacgccaatccaggcgtcaaccttg
cctttcactgtcgaaggcaaagatgttgcggggcaagcgcaaactggtacaggtaaaacg
ttagcttttttaacgtcgacattccattacttactaacacatcccgctattgaagggaaa
aaagccaatcaaccacgcgcattgctcatggctccaacacgtgaacttgccgtgcaaatc
tactctgatgcaaaagagctggctgagtatactggcttaaaaatggggcttgcttatggt
ggcgatggctatgatgagcaattaaaagtactgcaaaatggcgttgatatccttatcggt
acaactggccgtttaattgactatgcgaaacaaggtcatgttgatctcggcgctatccaa
gttgtcgtacttgatgaagctgatcgcatgtatgatcttggctttattaaagatattcgc
tggttattccgccgtatgcctgcggtcactgagagactaaacctactcttctccgcaaca
ctttcttatcgtgtaagagagctggcatttgagcaaatgaataaccctgaatatatcgaa
gtagagcctttgcagagaacaggtcatcgtattaaagaggagctgttttacccatcaaat
gaagaaaagatgcgtttattgcaaacattactcgaagaagagtggcctgaacgctgcatt
attttcgctaataccaaacatcgttgtgatgatatttgggcgcacctcgctgccgatggg
catcgtgtcggattattaacaggtgatgttgcacaaaagaaacgtttacgcattttagag
gaattcactcaaggtaatcttgatattttagttgcaaccgatgtcgcggctcgtgggtta
catatcccatcagtaacgcatgtgtttaactatgacttacctgatgattgtgaagactat
gtgcaccgtatcggccgtactggacgagcaggtgaaagtggtaattcaatcagtctcgct
tgtgaagagtatgcattgaatttacctgctattgaggaatacattcaacattctattcct
gtcagtaaatataatagcgaagcactgctaactgatctccctgcgccaaaacgtcgccat
cgtccgcgccctggagggcctcgtcgtaattcaaattcgccacgtcgccataatggccca
cgtaataaccataaacgttcaggctga
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