Providencia manganoxydans: JI723_19505
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Entry
JI723_19505 CDS
T08377
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag00541
Biosynthesis of various nucleotide sugars
pmag01100
Metabolic pathways
pmag01250
Biosynthesis of nucleotide sugars
Module
pmag_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JI723_19505 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmag01005
]
JI723_19505 (rfaD)
Enzymes [BR:
pmag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JI723_19505 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pmag01005
]
Core region
JI723_19505 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QQO62367
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Position
4271214..4272152
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AA seq
312 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDAGRTDILVVDNLKDGTKFANLVDLDIADYMDKEEFIVSV
MAGDDFGDIDAIFHEGACSSTTEWDGKYMMDNNYQFSKELLHFCLDREIPFLYASSAATY
GGRSDNFIEERQFEKPLNVYGYSKFQFDQYVRNILPEAQSQVCGFRYFNVYGPRENHKGS
MASVAYHLNKQINEGQNPKLFEGSETFRRDFIYVGDVAAVNLWFWQNNVSGIFNCGTGRA
ESFQAVADAVTQFHNDKNVSVEYIEFPEKLKGRYQSFTQADMTKLRAAGYQAPFKTVAEG
VAEYMQWLNQAD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagtcactggcggagctggttttattggtagtaacattgtgaaggcattaaat
gatgctggccgcaccgatattttagttgtcgataacctgaaagatggtacgaaattcgct
aaccttgttgatctcgatatcgctgattacatggataaagaagagttcattgtcagtgtg
atggcgggtgatgactttggtgatattgatgcgatattccatgaaggagcttgctcatca
accaccgagtgggatggaaaatacatgatggataacaactatcagttttccaaagagctc
ctgcatttctgcttagatcgtgaaataccttttctctacgcatcttcagctgcaacctat
ggtggccgtagtgataacttcattgaagaacgccaattcgaaaagccattaaacgtttac
ggttactccaaattccagttcgaccaatatgtacgtaatattttgcctgaagcgcaatca
caagtgtgcggcttccgttatttcaacgtttatggaccacgtgaaaaccataaaggcagt
atggccagtgtggcttatcatttaaataagcaaattaacgaagggcaaaatccaaagctc
tttgaaggtagcgaaactttccgtcgcgatttcatttacgttggtgatgttgctgccgtc
aatttatggttctggcagaataatgtgtcagggatttttaactgcggtacgggccgtgca
gaatctttccaagctgttgctgatgcagtcacgcagttccacaatgataaaaacgtttct
gttgaatacattgagttccctgagaaactcaaaggtcgctatcaaagctttacccaagcg
gacatgactaaattacgcgcagcaggctatcaggcaccatttaaaacggtggccgaaggt
gtcgctgagtacatgcagtggctgaatcaagcagactaa
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