Providencia manganoxydans: JI723_19540
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Entry
JI723_19540 CDS
T08377
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmag
Providencia manganoxydans
Pathway
pmag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JI723_19540 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_19540 (mutM)
Enzymes [BR:
pmag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JI723_19540 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JI723_19540 (mutM)
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JI723_19540 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QQO62374
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All DBs
Position
complement(4278934..4279743)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGNSIQYAIVRNSRLRWPVSEQIKRLSDGKILSVQRRAKYLL
LELEKGWIIIHLGMSGSLRILLEELPEEKHDHVDLVLKDGKVLRYTDPRRFGAWLWCEDL
ETSSVLAHLGPEPLSDEFNAQYLFEQAAKRKIAIKPWLMDNKVVVGVGNIYANEALFATG
ISPEKITNTLTLEQSIELVAQIKKVLQRSIEQGGTTLKDFLQSDGKPGYFAQELFVYGKK
GEPCLMCGTLILSIKQGQRSTFYCPNCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactacctgaggtcgaaaccagtcgtagaggaatagaacctcatcttgttgga
aactcaattcaatatgcgattgtacgcaatagccgtttgcgttggcctgtttctgaacaa
ataaaacgtttatctgatggaaagatcctcagtgtacagcgtcgtgctaaatatctgctg
cttgaattggaaaaaggttggatcatcattcatttaggtatgtctggtagcttgcgtatt
ttgctagaagaactgcccgaagaaaaacacgaccacgtcgatcttgttttgaaagatggt
aaagttttgaggtataccgacccgaggcgttttggagcttggttatggtgtgaagatctt
gaaacaagctcagttcttgctcatttagggccagaaccactctcggatgaatttaatgcc
caatatttatttgaacaagcagcaaaacgaaaaattgcgataaagccttggctaatggat
aacaaagtggtggttggtgttggtaatatttatgcgaatgaagctttatttgcgacagga
atttcgccagagaagatcaccaacactctgacactggaacaatcgattgagctagtcgct
caaatcaaaaaagtcctacagcgttcgattgagcagggtggtacgacattaaaagatttt
ctgcaatcagatggtaaaccgggatactttgcacaagaattatttgtttatggcaaaaaa
ggtgagccttgcttaatgtgtggcacattaatcttaagtattaaacaaggccagcgcagt
acattttattgcccaaattgccaaagatag
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