Paenibacillus marchantiae: PTQ21_01975
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Entry
PTQ21_01975 CDS
T08974
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PTQ21_01975 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_01975 (uvrA)
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PTQ21_01975 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PTQ21_01975 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
nSTAND3
AAA_25
DnaJ_CXXCXGXG
AAA_33
nSTAND6
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
WDQ33121
LinkDB
All DBs
Position
complement(387268..390126)
Genome browser
AA seq
952 aa
AA seq
DB search
MASENIVIKGARAHNLKNIDITIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGVEISSQTVEQMVDRIMQYPERTRLQILAPIVSGRKGEHKSIFADVSKQGFVRVR
VNGELRDLSEDIQLEKNKKHTIEVVVDRIVIKEEVQSRLADSIETALNLSGGQLLVDIMG
EEELRFSSNFACPVCGFSIEELAPRMFSFNSPFGACPDCDGLGVKMIVDPDLLVPDRSKT
IEEGAFDAWTGGTSTYYPQFLKSVCEHFNIPQNVPVEDLPAEQMNKLLQGTGTEKIRFRY
ENDFGQRKEALVTFEGIVNNLERRYRETASEGIREFIEGYMSAKPCGTCKGQRLKRESLA
VTINDHNMAYVTSLSIGEAGRFFDSLQLSEKEEIIAKLILKEINSRLGFLVNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDIGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGTIMSQGTPEEIMNDENSLTGQYLSGRKFIPV
RTERRSVGDRWLEVRGAKENNLKNLNVKIPVGVFTAVTGVSGSGKSTLINEILYKTLARD
LNRARVRPGQHKEIRGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAK
VRGYKKGRFSFNIKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKN
RNIADVLEMTVEDATQFFENIPKIHRKMQTLLDVGLGYINLGQPATTLSGGEAQRVKLAS
ELYRRSTGKTIYILDEPTTGLHVDDIDRLLNVLHRLVDSGESVLVIEHNLDVIKTADYIV
DLGPEGGSGGGTIVATGTPEDIIKVEASYTGKYLKPVLERDTERSKTLQLTE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
ttggcgagcgagaacattgtcatcaaaggcgcgcgagcgcataacctcaaaaacattgat
atcaccatcccgcgtgaccgttttgttgtattgaccggtctgagtggctcaggcaagtcc
tcgctggcttttgatacgatatatgccgaaggacagcgacgttacgttgaatcattatcg
gcttatgcacggcagtttctggggcagatggagaaaccggacgttgattccattgaagga
ttgtcaccagctatttccatagatcagaaaacgacaagccgtaacccgcgttccaccgtc
ggaaccgttacggaaatctatgactacctgcgtctgttatttgcacgtgtgggacatcct
cattgtccggatcatggcgtggaaattagctcccagaccgtagaacaaatggttgaccgc
ataatgcaatatcctgagcggacccggttgcagattctggcacctattgtctcgggacgc
aagggtgaacacaaaagtatatttgccgatgtgtccaagcagggctttgttcgtgtacgg
gttaacggtgaattgcgtgatttgtcggaagatattcaattggagaagaacaaaaagcat
acgattgaagtcgtcgttgaccggatcgtgattaaggaagaagtgcaatcacgtttggcc
gattctattgagactgcacttaatttgtccggtggacagctgctggtagatattatgggt
gaggaagagctgcgcttcagttccaactttgcctgcccggtgtgcggattcagtattgaa
gagctggcgccgcgcatgttttcgttcaacagcccattcggtgcctgcccggattgtgat
ggattaggtgtcaaaatgattgttgacccggacctgttggtgccggatcgaagcaaaaca
attgaagagggtgcgtttgatgcctggacaggtggtacatccacctattatccgcagttc
ctcaaatcggtatgcgaacactttaacattccgcaaaacgtacctgtagaagatctgcct
gctgaacaaatgaacaagctgttgcagggtacaggtacggagaaaattcgtttccggtac
gagaatgattttggacaacggaaagaagcattggttacctttgaaggtattgtgaataat
ctggagcgtcgttaccgtgagacagcatccgaaggtatccgtgaattcattgaaggttat
atgagtgccaagccttgtggaacatgtaaaggacagcgactgaaacgtgaaagccttgct
gttacgattaacgatcacaacatggcgtatgtgacaagtttgtccattggagaagctggc
cgtttcttcgattcgctacaattgagtgagaaagaagaaataatcgccaaacttatttta
aaagaaatcaacagccgtctcggcttcctagtaaacgtaggactggattacctgaccctg
agccgtgctgcaggaacgttgtccggtggtgaagcccagcggatcagactggcgacacag
attggttccagcctgatgggtgtgctgtatattctggatgagccgagtatcggtctgcat
caacgggataacgatcgtctgatctccacactcgctcacatgcgggatatcggtaacaca
ctgatcgtggttgaacatgatgaggatacgatgatggccgccgattatattatcgatatt
ggtccgggggcaggaatccacggtggtaccatcatgtcgcagggtacaccggaagaaatc
atgaatgacgagaactcgttaacgggtcaatatctgagtgggcgcaagtttattccggtt
cgtacagaacgccgtagtgtcggggaccgctggctggaagtgcgtggagcgaaggaaaat
aacctgaaaaacctcaatgtaaaaattccagtgggtgtatttaccgcagtaacgggtgta
tccggctcgggtaaatcgacgctaattaatgagattttgtataaaacgcttgctcgtgat
ttgaaccgtgcacgggtacgtccaggtcagcacaaagagattcgcggtctggaacatatt
gataaagttattgatattgaccagtcaccaatcggacgaacaccacgctccaacccggct
acgtatacaggcgtctttgatgacatccgtgatctgtttgcacagaccaatgaagccaaa
gtgcgcggatacaaaaaaggtcggttcagtttcaatattaaaggtggacgttgtgaagca
tgtcgaggggacggcattatcaaaattgagatgcacttcctgccggatgtctacgtgcct
tgtgaggtctgcaaaggcaaacggtataatcgcgaaacacttgaagtcaaatacaaaaat
agaaatattgcagatgtgctggaaatgacggtagaggatgcaacgcagttcttcgagaac
attccgaaaattcatcgcaaaatgcaaaccttgctcgacgtggggttgggctacattaac
ttgggccagcctgcaacaacgttgtccggtggtgaagcacaacgcgtgaagctcgcttcc
gagctgtatcgtcgtagtacgggtaaaacgatctatattctggatgagccaacgaccggt
cttcatgtcgacgatattgatcgtctgctgaacgtcctgcaccgtctggtggattccgga
gaatcggtactcgttatcgagcataacctggatgttatcaaaacagccgattatatcgtt
gatctgggtccggaaggtggaagcggtggcggaactattgttgcgacaggtacgcctgag
gatattattaaagtggaagcctcctataccggtaagtacttgaagccagtattggagcgg
gatacggaacgaagcaagacgttacaattgacggagtaa
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