Paenibacillus marchantiae: PTQ21_01980
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Entry
PTQ21_01980 CDS
T08974
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PTQ21_01980 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_01980 (uvrB)
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PTQ21_01980 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PTQ21_01980 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
nSTAND_NTPase5
AAA_22
AAA_19
AAA_25
HEM4
AAA_7
AAA_16
Kinesin
AAA_5
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
WDQ33122
LinkDB
All DBs
Position
complement(390857..392848)
Genome browser
AA seq
663 aa
AA seq
DB search
MSDIIMSDKTFEIESEFSPQGDQPAAIEELVKGVQEGKRYQTLLGATGTGKTFTIAQTIA
KLQRPTLIIAHNKTLAAQLASEFKDFFPNNMVEYFVSYYDYFQPEAYIPSSDTYIEKDSS
INEEIDKLRHAATSSLFERRDVIIVASVSCIYGLGSPHSYSSMLLSLRVGMEKPRNQILS
RLVEIQYQRNDINFVRGTFRVRGDVIEIFPASKGEHAIRVELFGDEIEKITEIDVLTGEL
VGEREHIAIFPASHFVTQEETMKVALVNIERELEERLEVLREQGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFRERGDTPYTLMDYFPDDMLIVVDESHVTLPQIRAMYNGD
QARKTVLVDHGFRLPSALDNRPLKFDEFEGKMDQIIYVSATPGPYEIEHTDTMVQQIIRP
TGLLDPIIELRPTKGQIDDLIGEINDRIAKDERVLITTLTKKMSEDLTDYLKEIGIKVRY
LHSEIKTLERMAILRDLRLGVFHVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSEGRVILYGDKVTDSMEKAMKETERRRAIQIAYNEEHGITPQTIRKKVRD
VIEATKVAESKKDYLTGAAEKMSKKERKSLIQRLEAEMKDAAKNLQFERAAELRDALLEL
RAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattataatgagcgacaaaacgttcgaaatcgaatcagagttttctccccaa
ggtgatcagcctgcagccattgaagaattggtgaagggcgttcaggaggggaagagatat
cagacattgctgggtgcaaccggtacgggtaagacgttcaccattgcacagacgattgcc
aagctgcaacgtcccacactgattattgcccacaataaaacgctggcagctcagcttgca
agtgagttcaaagacttttttccaaataacatggttgagtattttgtcagttactacgat
tactttcagccagaggcctatattccttcctcggatacgtacatcgagaaggattcaagt
atcaatgaagagatcgataagttgcgccatgcggctacgagttcattgtttgaacgcaga
gatgtcattattgtagcgagtgtatcctgcatctatggtttgggttcgccgcactcctat
tccagcatgcttctgtccctgcgggtagggatggagaaaccgcgcaatcagattttgtcc
cgtctggtggagattcagtatcagcgaaatgacattaactttgtgcgtggtacgttccgc
gttcgcggtgacgttatcgagattttcccggcatcgaagggtgaacatgcgattcgggtg
gaattgttcggtgatgagattgagaaaattacggagattgatgtgttaaccggagaactg
gttggggaacgtgagcacattgcgatattcccggcatctcacttcgtaacccaggaagag
acgatgaaggttgcgctagtgaatattgagcgtgaactggaagagcgtcttgaagtattg
cgtgaacaggggaaattgttggaggctcagcgactggagcaacgtacacggtacgatatc
gagatgatgaaagaagtcggcttctgttcagggattgaaaactattccggcccactgaca
ttccgcgaacgaggcgatacaccttacacgctaatggactattttccggatgatatgttg
attgtggtcgatgagtcccacgtgactcttccacagatccgtgcgatgtataacggtgac
caagcacggaagactgtactggttgatcacggattccgtctgccatctgcgctggataac
cgccctctcaaattcgatgagtttgaagggaagatggatcagattatctatgtatctgcg
acaccaggtccttacgagattgagcatacggatacgatggtgcaacagatcattcgtcca
accggtctgcttgatccaattattgaactgcgtccaacgaaggggcagatcgatgacctg
atcggtgagattaatgaccggattgcgaaagacgagcgggtcctgatcacaacattaacg
aagaagatgtccgaggatttaacagattatctgaaggagatcggaatcaaggtacgttat
ttgcactccgagatcaagacattggagcgtatggcgattctacgtgatctaaggctgggg
gttttccatgtccttatcggaatcaacttgctccgggaaggtctggatcttcctgaagtt
tctctggtagccattttggatgccgataaagaaggcttcttacgttcggaacgctcactg
attcaaacgattggtcgggcggcgcggaacagtgaaggtcgagttatcctgtacggtgac
aaagtgacagattcgatggaaaaagcgatgaaggaaacggaacgccgtcgtgcgatccaa
attgcgtataacgaggagcatggcattacaccacagacgattcgcaaaaaagtgcgtgat
gtgattgaagcaaccaaagttgccgaatccaagaaagactatcttacaggcgctgccgag
aagatgtcgaagaaggaacgtaagtcgcttattcagcgcctagaggcagagatgaaagac
gcagccaaaaacttgcagtttgagcgtgctgctgaacttcgtgatgcattgctggaactg
cgcgcagaatag
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